Malus sylvestris (European crab apple): 126595526
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Entry
126595526 CDS
T09027
Name
(RefSeq) amino acid transporter AVT1I-like
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
126595526
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msyl02000
]
126595526
Transporters [BR:
msyl02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
126595526
SSDB
Ortholog
Paralog
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Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
126595526
NCBI-ProteinID:
XP_050117759
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Position
13:complement(4609688..4611548)
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AA seq
412 aa
AA seq
DB search
MDSLKAEKIESQNLPSQEPTKGGGTTFFRTCFNGLNTLSGVGILSIPIALSEGGWLSLIL
LFLLALLCWYTGLLLRRCMDGNPRIKSYPDIGEAAYGQKGRVAISIFMYLELYLVAVEFL
ILEGDNLSQLFPSKGFNMAGLKVGGKQCFVLLTALVILPTTWLKSLGLLAYVSAGGVFAS
LFLVACVFWVGAVDGVGFHEGDVLLNFRGLPTAVNLYLFCYCGHAVFPTLCNSMKDRSKF
SKVLLICFVASTITYGSMAVLGYLMFGQELKSQVTLNLPVRKISSRIAIYITIINPLTKY
AIIITPIAAAIEDTRPFRNSLTISIFVRTLIVISTVIVALAIPFFSYLMALIGASLNVMV
SVLLPCLFYLKINVAARRFGFELVVIVAIMVIGSFVGVVGTYTSVKQIVRQF
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggacagccttaaagcagagaaaattgagagccaaaacctaccctcacaggaaccaacc
aaaggtggaggcaccacatttttcagaacatgttttaatggcctcaacacgttatcagga
gttgggattctatcgattccaattgcactttctgaaggagggtggctgagcttaatcctt
cttttcctgttggcacttctttgttggtataccgggttgcttctacgacgatgcatggac
gggaatccgcggatcaagagttatcccgacattggagaagctgcttatggacagaaagga
agagtcgccatctccatttttatgtaccttgagctgtatttggtagctgttgagtttcta
atattagaaggtgacaacttaagccagttgttcccaagcaagggttttaacatggcaggc
ctcaaagtcggaggcaaacaatgctttgttttgctcactgcccttgtaattctgccaacg
acatggctgaagagtctgggattgttggcgtatgtttccgccggaggagttttcgcttct
ctttttttggttgcctgcgtattttgggttggtgcggttgatggtgtagggtttcatgaa
ggagatgttcttctgaatttcagaggattgcctactgctgtgaacttgtatctgttctgc
tattgtggccatgcagtttttcccacattgtgcaattccatgaaggacaggagcaaattc
tccaaggtattacttatctgcttcgttgcaagcaccatcacctacggatcaatggcggtt
ttaggttacttgatgttcggacaagaattgaagtctcaagtcacattaaatcttccagta
cgaaaaattagttcaaggatagcaatttacattactataattaatcccctcacaaagtat
gcaattataatcactccgattgctgctgctattgaggatacacgcccttttcgcaatagt
ctcacaattagcatcttcgtgcgaaccttaattgtaattagcaccgtaattgtggccttg
gccattcccttttttagctacttaatggctttaatcggcgcatctctgaacgtgatggtc
tcagtcttgctgccgtgcttgttctacctcaagattaacgttgctgctcggagattcggg
ttcgagttggtggtaattgttgcgattatggtaatagggtcttttgttggcgtagtgggt
acgtacacttctgtgaaacaaattgtaagacaattctga
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