Malus sylvestris (European crab apple): 126595722
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Entry
126595722 CDS
T09027
Name
(RefSeq) DNA repair protein XRCC4-like isoform X1
KO
K10886
DNA-repair protein XRCC4
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
126595722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msyl03400
]
126595722
DNA repair and recombination proteins [BR:
msyl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
126595722
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4
XLF
XRCC4_CC
Ribonuc_P_40
InlK_D3
Motif
Other DBs
NCBI-GeneID:
126595722
NCBI-ProteinID:
XP_050117985
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All DBs
Position
13:18177402..18186039
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AA seq
259 aa
AA seq
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MEAPTPKHTCLKLDLQESQQPIFVKGTWFPSRFELSITDGRNAWICSASEDQVSDRAAQW
DQPVSEYVALAERYLGFQHPDSVYGFADAGDGYKRLSWTFEKEGTKLEWRWKCQPSPNSK
QTTAAVLDFLMDANVGLSEEVVRKTQSFERLKVEAEKCLAQSEKITNEKIEFESAIYAKF
LGVLNSKKAKLRELRDKLSNKEVAGKLPEEEEASSEQTEPYVSGDDKSEEEFLKDYPATS
KDVPTIRSRGRGRKRGTHK
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggaggcccccacccccaaacacacgtgcctaaagctcgatctccaagaatcccagcaa
ccaatcttcgtcaagggcacgtggttcccctcccgcttcgaactctccatcaccgacggc
cgcaacgcctggatctgctccgcctccgaagaccaggtcagcgaccgtgccgctcagtgg
gaccagccggtctccgagtacgtggcgctggccgagcgctacttagggtttcagcaccct
gactccgtatacgggttcgccgacgccggcgacggctacaaaagactttcatggacgttt
gagaaggaagggacgaagctcgaatggcggtggaaatgtcagccgtcgccaaacagtaag
caaaccacggcggcggtgttggattttctcatggatgcaaatgttgggctaagtgaagaa
gttgtgagaaaaactcaatcatttgagaggttgaaagtggaagctgagaagtgtctagca
cagagtgagaagattaccaatgagaagatagaatttgagtccgctatttatgcaaagttt
cttggcgtcttgaattcaaagaaagctaaactaagagagctccgagataagctttcaaac
aaagaggttgctgggaaactgccagaagaagaggaagcaagttcagaacaaactgaacct
tatgtcagtggcgatgacaaaagcgaggaagaatttttgaaagattatccagctacctcc
aaggatgttccaaccattaggtctcgaggtagaggtcgaaagaggggaacgcacaagtag
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