Malus sylvestris (European crab apple): 126595913
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Entry
126595913 CDS
T09027
Name
(RefSeq) protein argonaute 10-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126595913
03036 Chromosome and associated proteins [BR:
msyl03036
]
126595913
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
126595913
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
126595913
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
126595913
microRNA pathway
RISC loading complex
126595913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
E1_UFD
Clr5
Motif
Other DBs
NCBI-GeneID:
126595913
NCBI-ProteinID:
XP_050118251
LinkDB
All DBs
Position
13:complement(17082694..17091110)
Genome browser
AA seq
990 aa
AA seq
DB search
MPIRKKESSEQHLVIKPHLQNPVNPVQKAPKTAQNGKGPPPQEPQNPKLHNQTSPPAKNR
GRRRGRGGRKSDQGDVCMRPSSRHCAVAHLPASPSLGGAAPLATSPNGYVENGGNSVSME
MGFPTSSKSLSFAPRPGYGQVGIKCIVKANHFFAELPEKDLNHYDVSITPEVASRALNRA
IMAELVRLYKESDLGMRLPAYDGRKSLYTAGELPFAWKEFNIKLVDEPDGISGRKREREY
KVVIKFVARANMHHLGQFLAGKCADAPQEALQILDIVLRELSNKRYCPIGRSFFSPNIRT
PQRLGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVIEFVAQLLGKDVLSRTLS
DADRVKIKKALRGVKVEVTHRGSVRRKYRVSGLTSQPTRELVFPVDENLTMKSVIEYFQE
MYGFTIQHGHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPRD
RENDILQTVQHNAYDQDPYAKEFGIKISEKLASVEARILPAPWLKYHETGKEKNCLPQVG
QWNMMNKKMINGMTVSRWACINFSRGVQESVARGFCSELAQMCQVSGMEFNSEPVIPIYN
ARPEQVEKALKHVYHASMNKTKGKDLELLLAILPDNNGSLYGDIKRICETDLGLISQCCL
TKYVFKISKQYLANVSLKINVKMGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHPENGE
DSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWQDPVRGTVSGGMIRDLLV
SFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRH
HTRLFANNHRDRSSIDKSGNILPGTVVDTKICHPTEHDFYLCSHAGIQGTSRPAHYHVIW
DENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYLEPDMQENGSTGH
TAKGTRAAGESGVRPLPALKENVKRVMFYC
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgcctataagaaagaaggagagctcggagcaacaccttgtgatcaaaccccacttgcag
aacccagtgaacccagttcaaaaggcaccgaaaactgcccaaaatggcaaaggtccacca
ccccaggaaccccaaaaccccaaactccataaccaaacatcacctccagcaaaaaacaga
ggaagaagaaggggcagaggcggtcggaagtccgatcaaggtgatgtttgtatgcggccg
agctcgcggcactgcgctgtggctcatctacctgcctcaccaagcttgggtggtgctgct
cctctagctactagtccaaatggttatgtggaaaatggtggcaactcggtttccatggag
atggggtttccgacttcgagcaagtcgttgagttttgctcctcggcctggttatggacaa
gttgggatcaagtgtattgtgaaggccaaccatttctttgcagagttaccagagaaggac
ttgaaccattatgatgttagcataactcctgaagttgcatcgagagctttgaacagagct
atcatggcagaactggtgaggttgtacaaggaatctgacttaggaatgagactgcctgct
tatgatggtagaaagagtttgtacactgctggtgagctgccctttgcttggaaggagttc
aatattaagcttgttgatgaaccggatggaatcagtggccgaaaaagagaaagagaatat
aaagtggtaattaaattcgttgcacgagcaaacatgcatcatctgggccagtttctggct
ggtaagtgtgctgatgctccacaggaagcgctccaaattcttgacattgtattaagagag
ctctcaaacaagaggtactgccccattgggagatccttcttttcacccaatatcagaaca
ccacaacggcttggtgaggggttggaatcgtggtgcgggttttaccaaagtataagacct
acccaaatggggctttccctcaacattgatatggcttcagctgcgtttattgagcctctc
cctgtaatagagtttgtagcccagcttctaggcaaagatgtattgtctagaacattgtct
gatgctgaccgtgtaaagattaaaaaggctcttagaggtgtgaaagttgaagttacacac
agagggagtgttcgaagaaagtatcgagtttcaggattgacatctcaacctacaagagaa
ctagtgtttcctgttgatgagaacttgaccatgaagtccgtaattgaatacttccaagag
atgtatggattcaccattcaacacgggcatcttccttgccttcaagttggtaatcagaag
aaggcaaactatttacccatggaggcctgcaaaattgttgaggggcaacggtatacaaag
aggttgaatgagaagcaaattactgctctcttaaaggttacatgtcaaagacctagggat
cgtgaaaatgacatcctgcagactgttcaacacaacgcatatgaccaagatccttatgcg
aaggagtttggaatcaaaatcagtgaaaaactagcttcagtcgaagctcgaattcttcct
gctccttggctgaagtatcatgaaactggaaaagaaaagaattgtttgcctcaagttggt
cagtggaatatgatgaacaagaaaatgattaatggaatgactgtcagtcggtgggcttgt
attaatttttcaaggggagtgcaagagagtgtcgcacgtggattttgcagtgaacttgct
caaatgtgtcaagtatctggcatggaatttaattcagaacctgtaattccaatctacaat
gcgaggcctgaacaagtagagaaagctttgaagcatgtttatcatgcgtccatgaacaag
accaaaggaaaagatttagagctcctattggccattttgcctgacaacaacgggtccctg
tatggtgatatcaagcgaatatgtgaaacagatctcggtttaatatcacaatgctgtctc
acaaagtatgttttcaagatcagcaaacagtacttggctaatgtctccctaaagataaat
gttaagatgggtggcagaaacactgttctcttggatgctatcagctgcaggatacctttg
gtcagtgatataccaaccataatctttggagcagatgtgactcaccctgagaatggagaa
gattccagcccctcaattgctgctgtggtagcttcccaggactggcccgaagtgaccaaa
tatgctggattagtttgtgctcaagctcacagacaggaactcatacaggatttgtataaa
acatggcaagaccctgttcgtggcacagtcagtggtggcatgatccgggatcttctggtt
tcgtttaggaaggcaacaggacagaagcccctaaggattatattttacagggatggtgta
agtgaaggtcaattttaccaagtcttactttacgagcttgatgcaatccggaaggcatgc
gcttctctggaacccaactatcaaccaccagtgactttcattgtggttcaaaaacggcac
cacacacgattatttgctaataaccatagggacaggagcagcatagacaagagtgggaac
atattacctggtactgtggttgatactaagatttgccatccaaccgaacatgatttctat
ctctgcagtcatgctggtattcaggggacaagtcgcccagctcactaccatgttatttgg
gatgagaataattttactgctgatggaatccaatcattgacaaataacctgtgttacaca
tatgcaaggtgcacgcgctctgtctctgttgtacctccggcatactatgcgcatttggct
gctttccgtgctcgattctatctggagccagatatgcaagagaatggctctactggtcac
actgctaagggtacacgcgctgctggcgagtctggagtgcgaccattaccagccttgaag
gagaatgtaaagagagtaatgttttattgttag
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