Malus sylvestris (European crab apple): 126595957
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Entry
126595957 CDS
T09027
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR11
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
126595957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msyl03021
]
126595957
03036 Chromosome and associated proteins [BR:
msyl03036
]
126595957
Transcription machinery [BR:
msyl03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
126595957
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
126595957
RSF complex
126595957
WICH complex
126595957
B-WICH complex
126595957
NORC complex
126595957
BRF complex
126595957
NuRF complex (fruit fly)
126595957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
Myb_DNA-binding
DEAD
HDA2-3
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
126595957
NCBI-ProteinID:
XP_050118320
LinkDB
All DBs
Position
13:complement(13412185..13419006)
Genome browser
AA seq
1079 aa
AA seq
DB search
MARASKPQVSSDDALSNGSNSSDEEPINDQEEDEVDEEELEAVARPADSDDDEVAADENS
PGSDDDVPVDENDDGLDGEEDDEANLSNAEIGKREKARLRDMQNMKRQKVQEILDAQNAA
IEADMNNKGKGRLKYLLQQTELFAHFAKGDPSASQKKVKGKGRHASKITEEEEDEECLKE
EEDGLAGAGTTRLLTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTI
SLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPILRAVKFLGNPDERKHIREDLLV
AGNFDICVTSFEMAIKEKTCLRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNFRLLIT
GTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRL
KSDVEKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCN
HPYLFQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDY
LMLRGYLYCRIDGNTGGEDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYD
SDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLA
EQKTVNKDELLQMVRFGAEMVFSSKDSTITDEDIDRIIAKGEETTAELDAKMKKFTEDAI
KFKMDDTAELYDFDDEKDDKLDFKKIVSDNWIEPPKRERKRNYSESEYFKQTMRQGAPAK
PKEPRIPRMPQLHDFQFFNTQRLNELYEKEVRFLMQTHQKNQLKDTIEVEEPEEVGDPLT
AEEVEEKESLLEEGFSTWSRRDFNTFIRGCEKYGRNDIKSIAAEMEGKTEEEVERYAKVF
KERYKELNDYDRIIKNIERGEARISRKDEIMKAIGKKLDRYKNPWLELKIQYGQNKGKLY
NEECDRFMICMVHKLGYGNWDELKAEFRTSPLFRFDWFVKSRTTQELARRCDTLIRLVEK
ENQEYDERERQARKEKKLAKSMTPSKRALGRQPTESPNSGKKRKQLTMDDYVSSGKRRK
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggcgagagcttcgaagcctcaggtttcgtccgacgacgccctatccaacggctccaat
tcgtccgacgaagagccgatcaacgaccaggaggaggacgaggtcgatgaggaggagctc
gaagccgtggctcgccccgctgactccgacgacgacgaggtcgccgccgacgagaactcc
cctggctccgacgatgacgtgccggtcgatgagaacgatgatggtttggatggagaagag
gatgatgaagctaatttaagtaatgctgaaattggaaaacgtgagaaggcgaggctcaga
gacatgcaaaatatgaagagacaaaaggttcaggaaatattggatgcacaaaatgcagcc
attgaggctgacatgaacaataaggggaagggacggttgaagtatcttctgcagcaaaca
gagttatttgcccattttgctaaaggtgacccatctgcatctcagaagaaagtgaaggga
aaaggtcgccatgcttccaaaataactgaagaggaagaggatgaagaatgccttaaggag
gaagaagatggtttggctggggctggaaccacacggcttttgacacaaccttcttgtatt
caggggaagatgagggattaccaactggctggattgaactggctcatacgactctatgaa
aatggtataaatggaatccttgcagatgaaatggggcttggtaaaacattgcaaaccatc
tccttattgggatacctgcatgagtttagaggaataactggccctcatatggtagttgct
ccaaagtctactcttggaaactggatgaatgagattcggcgtttctgccccatcttgcgt
gctgtgaagtttcttggtaatcctgatgaaagaaagcatatacgtgaggacctgctggtt
gccgggaattttgatatatgtgttacaagttttgaaatggccatcaaagagaagacctgc
ttacgccgttttagctggcgttatataataattgatgaagctcatcgtatcaagaatgag
aattcactgctttcaaaaacaatgaggctgtataatactaacttccgcctcctaattacg
ggtacaccacttcagaataatcttcacgaactatggtcgctgcttaactttctcctgcca
gagatatttagttctgctgaaacttttgatgaatggtttcaaatatctggtgagaacgac
cagcaagaggttgttcaacagcttcacaaggtcctccggccatttcttcttagaaggttg
aagtcagatgttgagaaaggtttgcctccgaaaaaagaaacaatactcaaagtaggcatg
tcacaaatgcagaaacagtactacagggctttattacaaaaagatcttgaagttgttaat
gctggtggagaacgtaagcgccttctgaacatagcaatgcagcttcgtaagtgctgtaat
catccttatctttttcaaggtgctgagcccgggcctccttatacgactggagaccatctc
atcacaaatgctggtaaaatggttcttttggataagttgcttccaaagttaaaggagcgt
gattctagggtcctaatattttcacagatgactaggctgctagatatcctggaagattat
ttaatgttacgggggtacctgtattgtcggattgatggcaatactggcggagaagatcgt
gatgcttctattgatgccttcaacaagcctggaagtgagaaatttgtatttttgctatcg
accagagctggaggacttggtattaatcttgccactgcagatgttgtcatcctttatgac
agtgattggaaccctcaagttgatttgcaagcacaagatcgtgctcacaggattggtcaa
aagaaagaagttcaagtgttccggttctgcactgagtatactattgaagaaaaagttatt
gagagggcttataaaaagcttgctcttgatgctttggtgattcaacaagggcgattagca
gagcaaaaaactgttaataaagatgagttacttcaaatggtgaggtttggtgctgaaatg
gtcttcagttccaaggatagcaccattacagatgaggacatagataggattattgctaaa
ggagaagagacaactgctgagcttgatgcaaagatgaagaaatttactgaagatgctatc
aaatttaagatggatgatactgctgaattgtatgactttgatgatgaaaaggatgacaag
cttgatttcaagaaaattgttagcgataactggattgaaccaccaaaaagagagcggaag
cgcaattactcagagtccgaatactttaagcaaacaatgcgccaaggtgctccagcaaaa
ccgaaagagcctcgaattccacgcatgcctcaattacatgatttccaatttttcaacaca
cagaggttgaatgagctgtatgagaaggaagtacggttcctcatgcaaactcatcagaag
aatcagttgaaagatacaatagaggtggaggaaccagaagaagttggagatcctttgact
gctgaggaggtggaagaaaaggaaagcctgttagaagagggtttctctacttggagtaga
agagattttaataccttcattaggggctgtgagaagtatggccgtaatgacataaaaagc
attgctgctgagatggaagggaaaacagaggaggaagttgaaagatacgcaaaggttttt
aaagaaagatacaaggagttaaatgattatgacaggatcattaagaacattgaaagaggt
gaggccagaatttcccgcaaagatgagatcatgaaagccattgggaagaagttggatcgt
tacaagaatccatggctggaattgaaaatccagtatggtcaaaacaaggggaagttgtac
aatgaagaatgcgatcgtttcatgatatgcatggttcacaaacttgggtatgggaattgg
gacgaattgaaggcagaattccgcacatcacccttgtttcgttttgattggtttgtgaag
tctcgcacaactcaggaactcgctaggaggtgtgatacattaattagattggtggagaaa
gagaaccaagaatacgatgagagggagagacaggcccgcaaagagaagaagcttgctaag
agcatgacaccatcaaagcgggccttgggtagacagccaactgagagcccaaattctgga
aagaagaggaagcaattaaccatggatgattatgtcagctcgggaaaaaggaggaaatga
DBGET
integrated database retrieval system
