Malus sylvestris (European crab apple): 126595974
Help
Entry
126595974 CDS
T09027
Name
(RefSeq) chromatin structure-remodeling complex protein BSH isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03082
ATP-dependent chromatin remodeling
msyl03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
126595974
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
126595974
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
msyl01009
]
126595974
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msyl03021
]
126595974
03036 Chromosome and associated proteins [BR:
msyl03036
]
126595974
Protein phosphatases and associated proteins [BR:
msyl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
126595974
Transcription machinery [BR:
msyl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
126595974
SWI/SNF complex
126595974
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
126595974
PBAF complex
126595974
SWI/SNF complex
126595974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
GP70
Motif
Other DBs
NCBI-GeneID:
126595974
NCBI-ProteinID:
XP_050118335
LinkDB
All DBs
Position
13:9944110..9947434
Genome browser
AA seq
294 aa
AA seq
DB search
MSAAPKSSKLKKSKNWCKEGEREEKAMKGQLSASSRGPVKFRMPTAQNLVPIRLDLDIDG
QRFKDCFTWNPSDPDSEIVVFAKRTAKDLKLPPGFITVIASAIQSQIVEFRSLEGQDMYT
GERIVPIKLDLRVNRTVIRDQFLWVSFKEFCYLIISMPCFYNVGLYMFNGFQDLNNFESD
PEEFAKTFCADLGIQDPEVGPAIAFSIREQLYEIVVQSVASVRETRINKKGRRGAEYTPV
SKVGSTGLDLVKLFGHRSSVVRKRKEWDVYEPIVDLLSTEEVEALQAKEERIAR
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccgctccgaaatccagtaaactgaagaaatcaaaaaattggtgcaaggaggga
gaaagagaagagaaagccatgaaaggccagctgtcggcttcctccagaggccctgtcaag
ttcagaatgccaacagctcagaatttggtaccaattcgcttggacctcgacatcgacggc
caaaggttcaaagactgcttcacttggaacccatctgaccctgactcggagattgtggtg
ttcgcgaaaaggacagcgaaagacttgaagcttcctccgggtttcatcacagtcattgct
tctgccattcagtcacaaattgttgaatttcgatcacttgaggggcaagacatgtacacc
ggcgagaggattgttccgattaagcttgatcttcgagtgaaccgcactgtcattagggac
cagtttttatgggtaagcttcaaagagttctgctatcttatcatttcaatgccctgcttt
tacaatgtgggtttgtacatgttcaatggatttcaggacttgaacaactttgaaagtgat
cctgaagagtttgctaaaactttctgcgcggacttaggtattcaagaccctgaagttggg
cctgcaattgccttttcaattagagaacaactgtatgagattgtagttcaaagtgtagct
tcagtaagagaaaccagaattaacaagaagggacgccgtggagctgagtatactccagtc
agtaaagtaggtagtactggattggacctggtgaagttatttggtcacagatctagtgtt
gttcggaaaagaaaggagtgggacgtatatgaacccatcgttgatcttctatcaaccgag
gaagtggaggcccttcaagcgaaagaagaaaggattgctcggtga
DBGET
integrated database retrieval system
