Malus sylvestris (European crab apple): 126596023
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Entry
126596023 CDS
T09027
Name
(RefSeq) novel plant SNARE 13-like
KO
K08494
novel plant SNARE
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126596023
Membrane trafficking [BR:
msyl04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
126596023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
MCPsignal
GCIP_C
Prominin
Helo_like_N
TMPIT
DUF3671
Cob_adeno_trans
Occludin_ELL
YkyA
Motif
Other DBs
NCBI-GeneID:
126596023
NCBI-ProteinID:
XP_050118407
LinkDB
All DBs
Position
13:10208884..10213306
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AA seq
268 aa
AA seq
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MASNLPMSPQLEQIHGEIHDNFRALANGFQKLDKIKDSNRQSKQLEELTGKMRECKRLIK
EFDREVKDEESRNPPDVNKQLNDEKQSMIKELNSYVQLRKTYMNSLGNKKVELFDMGAGV
SEPTADENVQMASAMSNQELINSGMKTMDETDQVIERSKKVVEQTVEVGTQTAVTLKGQT
DQMGRIVNELDTIQFSIKKASQLVKEIGRQVATDKCIMLFLLLIVIGVIAIIVVKIVNPS
NKNIRDIPGLAPPAARRLLSTSPLQQFE
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaacttgccgatgagccctcagttggagcagatccatggcgaaatccacgac
aattttcgagccctcgcaaatggcttccagaagctggataagatcaaagactccaataga
caaagtaaacagctggaggaacttacaggaaagatgagggaatgtaaaagattaattaaa
gagtttgatcgtgaagtcaaggacgaggagagccgaaatcctcctgacgtgaataaacag
cttaatgatgaaaagcaatctatgatcaaagagctgaattcatatgtgcaattgagaaaa
acgtatatgaatagccttggtaacaagaaagtcgaactctttgatatgggagcaggagtt
agtgaacccactgctgatgagaatgttcaaatggcttcagctatgtcaaatcaagaacta
atcaattctgggatgaaaacaatggatgagactgatcaggtcattgaacgctctaaaaag
gttgttgagcaaacagttgaagtgggaactcaaactgctgttaccttaaagggccaaact
gaccaaatgggccgcattgtaaatgagctggacacaattcagttttcaattaagaaggcc
tctcagcttgtaaaggagattggtagacaggtggcaacagataaatgcatcatgcttttt
cttttgcttattgtaattggtgtaatagcaattattgttgtgaagattgtgaaccccagc
aataaaaacataagggatatccctggattggcgccgcctgctgcaaggaggcttttgtca
acgagtcctctgcaacagttcgaatag
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