Malus sylvestris (European crab apple): 126596050
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Entry
126596050 CDS
T09027
Name
(RefSeq) alpha-amylase 3, chloroplastic-like isoform X1
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00500
Starch and sucrose metabolism
msyl01100
Metabolic pathways
msyl01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
126596050
Enzymes [BR:
msyl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
126596050
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Gene cluster
GFIT
Motif
Pfam:
Ig_N_CWD1
Alpha-amyl_C2
Alpha-amylase
Glyco_hydro_70
Motif
Other DBs
NCBI-GeneID:
126596050
NCBI-ProteinID:
XP_050118468
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Position
13:complement(5067783..5074550)
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AA seq
907 aa
AA seq
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MSTVRIEPLLHHYRRQKPSHRLPPSKHPLKLSSSFTAFPKKLVVSNGRSFCNFQPPTLSV
RAASTDTATVEATEFADAFYKETFPLKRTEVVEGKMIVKLDNGKDAKNWVLTVGCNLPGK
WVLHWGVNYVDDVGSEWDQPPSEMRPAGSVSIKDYAIETPLKESLSPVGGDTSHEVKIDV
TPNSAIAAINFVLKDEETGAWYQHRGRDFKVPFVCYLQDDDNVVGATRALGAWSVFFFIL
GTLGKLSNVFVKAETSNSKDQESSSESRDPQQKTMRLEGFYEELPIAKEIAVNHSATVSV
RKCPETTKNLLYLETDLPDHAVVHWGVCRDDAKRWEIPAAPHPPETVVFKDKALRTRLQQ
REDGNGCSGLFTLEEGLAGFLFVFKLNETMWLNCVGNDFYIPLLSSNNSIAVHSEVQSED
AQVPDRSRETNFTAYTDGIINEIRNLVSDISSEKSQRKRSKEAQETILQEIEKLAAEAYS
IFRTTVPTLPEEIIAETERVKVAPAKICSGTGTGFEILCQGFNWESSKSGRWYEELKSKA
AELSSLGFTVIWFPPPTDSVSPQGYMPRDLYNMNSRYGNMDELKETVKTFHDAGLKVLGD
AVLNHRCAEYQNQNGVWNIFGGRLNWDERAVVADDPHFQGRGNKSSGDSFHAAPNIDHSQ
DFVRKDIREWLCWLRDDIGYDGWRLDFVRGFWGGYVKDYMDASEPYFAVGEYWDSLSYTY
GEMDHNQDAHRQRIVDWINATNGTCGAFDVTTKGILHAALERCEYWRLSDEKGKPPGVLG
WWPSRAVTFIENHDTGSTQGHWRFPNKKEMQGYAYILTHPGTPTVFYDHIFSHYQSEIAA
LISLRNRNKLNCRSRVKITKAERDVYAAIIDEKVAIKIGPGHYEPASGPQNWNKSLEGRD
YKVWEAS
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacggttaggatagagcccctcctccaccactaccgtcgacagaaacccagccac
cgccttccgccgtcgaagcacccattaaagctcagctcttctttcactgcttttccaaag
aagctagtagtctccaatggccgcagcttctgcaacttccagcctcccactctcagtgtc
agagctgcctccaccgatacagccaccgtcgaggccaccgaattcgccgacgccttctac
aaggagaccttccctctcaagcgaactgaagtggtggagggaaagatgatcgtgaaatta
gataatgggaaggatgcaaagaattgggtgctgactgtgggttgtaatcttcctggaaaa
tgggttcttcactggggagttaattatgtggatgacgtcggcagtgaatgggatcagcct
cctagtgaaatgagaccagctggttcagtttccatcaaggactatgcaatagagacaccc
ttgaaggaatcgttgtcgccggtgggaggcgatacatctcacgaagtgaagattgatgtt
acacccaacagcgcaatcgcagcgataaattttgttctcaaggatgaagaaaccggtgcc
tggtatcagcatagagggagagactttaaagtgcctttcgtttgctacctgcaagacgat
gacaatgtagttggagcaacaagggccttgggcgcgtggtcagtcttcttttttattcta
ggaactttgggaaaactatccaatgtgtttgtcaaagcagaaacatcaaattccaaagat
caagaaagcagcagtgaatccagagaccctcaacagaaaactatgcgtctagaaggattc
tatgaagaactgccaattgcaaaagaaattgctgttaaccattcagcaactgtttccgtt
aggaagtgccctgagactactaagaatcttctatacttggaaacagatttacctgatcat
gctgttgttcactggggagtttgcagagatgatgctaaaagatgggaaattccagctgcc
ccgcatccaccagaaacagtagttttcaaggacaaggctttgcggactcgattacagcaa
agggaggatggaaatggatgttctggactgtttaccttggaagaaggactcgcaggattt
ctttttgttttcaaactaaatgaaactatgtggttgaattgtgtgggaaatgacttctac
atcccccttttaagctcaaataactcaattgctgtgcatagtgaggttcagtctgaagat
gctcaggtacctgacagaagtagagaaactaattttactgcatataccgatggtataatc
aatgaaataaggaacttggtgagtgatatttcctctgagaagagtcaaaggaaaagatcc
aaagaagcacaagaaaccattcttcaagaaatagaaaaattggctgctgaagcgtatagt
atcttcagaactactgttccaactctaccggaggaaatcattgcagaaactgaaagggtg
aaagtcgcccctgccaaaatatgctcggggacaggaacaggttttgaaatattgtgccaa
ggttttaactgggaatctagtaaatctggaagatggtacgaggaactcaaaagtaaagct
gcagaattatcctcactaggtttcactgtgatttggttcccacctcctacagattctgtg
tcgcctcaagggtacatgccgagggatttatacaatatgaactccagatatggaaatatg
gacgaactgaaggagactgtgaagacattccatgatgccggtttaaaagttcttggagat
gctgttctgaatcaccgttgtgcagaatatcagaatcaaaatggtgtttggaatatattt
ggtggtcgtttaaattgggatgaacgtgcagttgttgcagatgatccacattttcagggt
aggggcaacaaaagtagtggagatagttttcatgctgccccaaacattgatcattcacaa
gattttgtgaggaaggatatcagagaatggttatgctggctaagggacgatattgggtat
gacggatggaggcttgatttcgttagaggattttggggtggctacgtcaaggactacatg
gatgccagtgagccctactttgccgtaggcgagtattgggattccctaagttatacatac
ggggaaatggatcacaatcaagatgcacacaggcagagaattgttgattggatcaacgct
actaatggaacttgtggtgcattcgatgtcacaacaaaagggattctccatgcagcactg
gaaagatgcgagtattggcgattgtcagatgagaagggtaagcctccaggggttcttgga
tggtggccatctcgtgctgtcactttcatagagaatcatgatactggttctactcagggt
cattggaggtttccaaataaaaaagaaatgcaaggatatgcatacattttgactcatccg
ggaacacctacagttttctatgaccacattttctctcactaccaatctgaaattgctgct
ctgatctctctcagaaaccggaacaagctcaactgtcggagtagagttaaaatcaccaag
gcagaaagagacgtctacgcggccatcattgatgaaaaggtcgccatcaaaatcggacca
ggtcattacgaacctgctagtggacctcaaaattggaataaaagccttgagggaagagac
tacaaggtctgggaagcgtcataa
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