Malus sylvestris (European crab apple): 126596082
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Entry
126596082 CDS
T09027
Name
(RefSeq) probable U3 small nucleolar RNA-associated protein 7
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msyl03009
]
126596082
Ribosome biogenesis [BR:
msyl03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
126596082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BING4CT
WD40_Prp19
Beta-prop_THOC3
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
ANAPC4_WD40
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_WDR36-Utp21_2nd
Beta-prop_VPS8
WD40_Gbeta
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_Aladin
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
126596082
NCBI-ProteinID:
XP_050118517
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All DBs
Position
13:12507899..12513785
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AA seq
539 aa
AA seq
DB search
MGVKQDEGNYVPPNEKSDNITDELEIKMNKFLRGKANLEGLQDKKLKGQLTIREELYGKS
AQAAAMAEKWLLPSEGGYLEAEGMEKTWRIKQESIAREVDISSSRNQFDIILPDLGPYTL
DFTSSGRHMAIGGRKGHLAIVDMKTMRLIKEFQVRETVRDVVFLHNDLFFAAAQKRYPYI
YNRDGTELHCLKEHGAVLRLQFLKNHFLLASINNFGQLHYQDVTMGEMVGSYRTGIGRTD
AMQVNPYNGVVALGQSLGTVSMWKPTSSASLLRLLCHKGPVSAIAFHPNGHLMATAGKER
KIKLWDLRKLGDEPLQTLPGNAKTLDFSQKGLLACQLGNGSSVQILRDLDGNQMYKTYMN
HGMVKGYQIEKLLFRPYEDVLGIGHSMGWSSILIPGSGEPNFDTLVANPFETSKQRRESE
VHSLLDKLPAETIMLDPAKIGTLKPERKKEKPTKQEKMAEIEVAVEVVKGIKLKKKTKGR
SKPSKRTIKKKDLIAKAKSPFLAQQMKEEEQVARKKQKTTEFVEPPTSLMRFVRKKATA
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgaaacaagatgagggcaattatgtgcctccaaacgagaaatccgacaatata
actgatgagctcgagataaaaatgaacaagtttcttagaggcaaagctaatttggagggc
ttgcaagataaaaagttgaagggtcaacttaccattcgagaagaattatatgggaaatct
gcacaagctgctgccatggccgagaagtggcttctaccaagtgagggaggctatttggag
gctgaaggcatggagaagacatggaggatcaaacaagaatcaattgctcgtgaagtagat
atatcaagctcaaggaatcaatttgatattatcttaccagatctcggaccgtacacgctg
gatttcacctcaagtggtcgccatatggcaattggtggacgcaagggccatctggctatt
gtagacatgaagactatgaggctgattaaagaatttcaggttagagaaacagtgcgggat
gtggtgttcttgcacaacgatttattctttgctgcagcccagaaaaggtatccctatatt
tataaccgggatggcactgaacttcattgcttaaaggaacatggtgcagttttaaggctt
caattcttgaaaaaccacttccttttggcatcaataaacaattttgggcagcttcattat
caggatgtgacaatgggtgagatggtaggtagttacaggacaggcataggccgtactgat
gcgatgcaggtgaacccctataatggggttgttgctttgggtcaatcacttggtacagtt
tccatgtggaagcctacaagctctgcgtctctacttagacttctgtgtcacaagggaccc
gtctcggcaatcgcattccaccctaatggccatctcatggcgacagctgggaaagagagg
aaaattaagctttgggacttgaggaaacttggggatgaaccgctccaaactttaccgggc
aatgcaaagacgttggattttagtcagaagggtcttttagcttgtcagctgggaaatgga
tcatctgtacaaatcttgagagatttggatgggaatcagatgtacaagacatacatgaat
catggaatggttaaaggttaccaaatagaaaagctgttgtttcgaccttatgaagatgtt
ttaggcatagggcactctatgggatggtccagtatcctgattcctggttcaggggaaccc
aattttgataccttggtggcaaatccatttgaaacgtctaaacaaagaagagagagtgaa
gtgcactctttacttgataagctcccggctgagacgattatgcttgatcctgcaaagatc
ggcacattgaagcccgagagaaagaaagagaaaccaacaaaacaagagaaaatggccgag
attgaagttgctgttgaagttgtgaagggcattaaactgaagaagaaaacaaaggggagg
agtaagccgagtaagaggacgataaagaaaaaagacttaattgcaaaagcaaagagtcct
ttcttagcgcaacaaatgaaagaggaagaacaagtagctagaaagaagcagaaaacgact
gaatttgtggagccaccaacatcgttgatgcggtttgtccgcaagaaagcaactgcatga
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