Malus sylvestris (European crab apple): 126596093
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Entry
126596093 CDS
T09027
Name
(RefSeq) nuclear pore complex protein NUP155-like
KO
K14312
nuclear pore complex protein Nup155
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126596093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126596093
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126596093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
126596093
NCBI-ProteinID:
XP_050118524
LinkDB
All DBs
Position
13:1190570..1198157
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AA seq
1467 aa
AA seq
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MSWEDEVVMRDVTHAGIVVGDRIGREVASQLDLEEALEASRYVSHPYSTHPREWPPLVEV
VDTWELPLVLIERYNAAGGEGNSLCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEYSGE
DQAICAVGLAKSKPGVFIEAIQYLLILATPVELSLVGVCCSGGAGGTDPYAEVSLQPLPE
YTVPSDGITMTCITCTDKGRIFLAGRDGHIYELHYTTGSGWQKRCRKVCLTAGIGSVISR
WVVPNVFKFGAVDPIVEMVFDNERHILYARTEEMKLQVYIVGQNADGPLKKVAEERNLIN
QRDHYGGRQSTGPRGPNRLPKSSIVCISPLSTLESKSLHLVAVLSDGRRMYLTTSPSSGN
LGGFNTNHYKPTCLKVVTTRPSPPLGVSGGLAFGSVSLAGRSQNDDLSLKVEAGHYSAGT
LVLSDSSPATTTSLLIVSRDSTAQSTGLSTSGISSRSSRALRESVSSLPVEGRMLFVADV
FPLPDTATTVLSLYSEIEYGGYEGLDESSEKVSGKLWARGDLSIQHILPRRRVVVFSTMG
MMEIVINRPVDILRRLFEANTPRSILEEFFTRFGAGEAAAMCLMLAARIVHSETLISNVV
AQKAAEAFEDPRLVGMPQLEGSSALSNTRTAAGGFSMGQVVQEAEPVFSGAHEGLCLCAA
RLLFPLWELPVMVIKGDSMSENGLVVCRLSLEAMQVLENKIRSLESLLRSRRNQRRGLYG
CVAGLGDLTGSILYGAGSELGGGDRGTVRNLFGAYSRNTESSDGGMSNKRQRLPYSPAEL
AAMEVRAMECIRQLLLRSSEALFLLQLLSQHHVTRLVQGLDATVRQKLVVMTFHQLVCSE
EGDHLATRLISALMEYYTGPDGRGAVDDISGRLREGCPSYYKESDYKFFLAVECLERAAI
APDPDKESLAREAFNFLSKVPESADLRTVCKRFEDLRFYEAVVRLPLQKAQALDPAGDAF
NDHIDAAVREHALAQREQCYEIVISALRSLKGEPSQREFGSPLRPAARSVLDQVSRNKYI
SQIVQLGIQSPDRLFHEYLYRAMIDLGLEDILLEYGGPDLVPFLESAVSGVTSSSSPIGH
SGTSIPSNQAKYSELLARYYVSKRQHLLAARVLLRLAERRSSDTVDVPTLDQRYHHLSNA
VLQAKNASNNDGMVGSARGAYDDGLLDLLEGKLSVLRFQIKIKEELEAFASRIEALADAS
EPVQSGTSGDANLAIIAREKAKELSLDLKNITQLYNEYALPFELWEICLEMLYFAYYSGD
ADSSIVRETWARLIDQALSRGGIAEACAVLKRVGSHIYPGDGAGLPLDTLCLHLEKAAMD
RLESGVESVGDEDVARALLAACKGATEPVLNTYDQLLTSGAILPSPNLRLRLLRSVLVVL
REWAMSVFAQRMGTSATGASLILGGTFSMEQTAVLNQGVRDKISSAANRYMTEVRRLALP
QSQTEAVHHGFRELEESLTSPFSFDRF
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgggaggacgaagtcgttatgcgtgatgtcacccatgcgggtatcgtcgtcggc
gaccgcattggccgtgaagtcgcgtcgcagctcgatcttgaagaagccctagaagcgtcc
cgatacgttagtcacccctattctactcatcccagagagtggccacctttggttgaggtg
gtggatacttgggagttgcctctcgtacttattgaaagatacaatgcagctggtggggaa
ggaaattcattatgtgggatttttcccgagattcgtagggcatgggcatcagtagataac
tccttgtttctctggcgtttcgacaagtgggatggacaatgtccagaatatagcggggag
gatcaagctatttgtgctgttggccttgctaaatctaaacctggtgttttcattgaagct
attcagtatcttttgattttggcaacccctgttgagttaagtcttgtaggtgtatgttgc
tctggaggggctggtggcacagatccttatgcagaggtctcactacagccattgccagag
tatacagtaccatctgacggaatcacaatgacatgtatcacgtgtactgacaagggtcgt
attttccttgctgggcgtgatggccacatttatgagctacattatacgactggatcaggc
tggcaaaagcgttgtcggaaagtttgtctgactgctggtataggaagtgttatttcaaga
tgggtagtacctaatgtttttaagtttggagctgttgaccccattgttgaaatggttttt
gataatgaaaggcatatcctgtatgcacggactgaagaaatgaaacttcaggtgtatatt
gtggggcaaaatgctgatgggccattgaagaaagtggcagaagaaaggaatctgataaat
cagagggatcattatgggggtagacaatcaactggacctagaggtccaaatcgattgcca
aagtcatcaatagtctgcatatcaccattgtctacactggaatccaagtctctacacctt
gttgctgttttgtcagatggcagaaggatgtatcttaccacttctccttctagtggaaat
ctaggtgggttcaatacaaaccattataaacctacctgtttaaaagttgtgacaacaagg
ccttctcctccactaggggtcagtggtggacttgcctttggaagcgtgtctcttgcgggt
aggtctcagaatgatgatctctccctaaaggttgaggcaggacattattctgctggaacc
cttgtcctttctgattcatctccagcaaccacaacttctcttcttattgtgagccgtgat
tcaacagcacaatcaactgggttaagtacttcagggataagttccaggagttctcgggca
ctgcgggaatctgtatcttctttaccagttgaaggtcgaatgctttttgtagcagatgtt
ttccccttgcctgatactgcaacaactgtactgtctctatattcagaaatcgaatatggt
ggatatgaaggcttggatgagtcctctgaaaaggtatctggaaagctttgggccagaggt
gacctgtcaatccaacatatattgccaagaaggcgcgttgttgttttcagtactatggga
atgatggaaatagttatcaataggcctgtggacattctgagaaggttgtttgaggccaac
acccccaggtcaatcttagaagaattcttcactcgttttggagctggtgaggctgctgca
atgtgtctaatgcttgcagccaggatagtacattcagaaactcttataagcaatgttgtt
gcacagaaggcggctgaagcttttgaagacccaagattagttggaatgccacaacttgag
ggtagcagtgcattatctaatactagaaccgctgctgggggattcagcatggggcaagtt
gttcaggaggctgagcctgtgttttcaggtgcacatgaagggctctgtttgtgcgctgca
aggttgctatttcctttgtgggaacttccagtcatggttataaaaggtgattctatgtca
gaaaatgggttagtcgtatgcagactctctcttgaggctatgcaagtccttgaaaacaag
attcgttcgctagagagtttgttgaggtccagaaggaaccaaaggaggggactttatggc
tgtgttgctggtttaggagatctaactggttctattctttatggagccggttcagaatta
ggtggtggtgaccgtggtacggtgaggaacttatttggtgcttactcaaggaacactgag
tctagtgatggtggtatgtctaataaaaggcagagattaccatatagtcccgctgaacta
gcagcaatggaggttagggcgatggaatgcatcaggcagttacttcttagatccagtgaa
gccctgtttctgctccagcttctttcacagcaccatgtcacacggctggttcaggggctt
gatgctaccgtacgacagaaattagttgtaatgacatttcatcagttagtttgttcggag
gaaggtgaccaccttgctacaaggcttatatctgctcttatggagtattatactggtcct
gatggcaggggggcagtagatgatattagtgggagattacgggaaggctgtccaagctat
tataaggagtctgattacaagttttttctagctgtggagtgtcttgagagagctgctata
gctccagatcctgacaaggagagtcttgctagagaagccttcaatttcttaagtaaagtt
ccagaatctgctgacttacgaactgtttgcaaacggtttgaggatttgaggttttatgaa
gcagtggttcgcttgcctttacaaaaggcacaggctcttgatcccgcaggtgatgctttt
aatgaccacattgatgcagcagttagagagcatgcgcttgctcaacgtgaacagtgctat
gagattgtcatcagtgcattgcgttctctgaaaggcgagccttctcagagggagtttggt
tctcctttgaggcctgctgcacgatctgtccttgatcaggtctctcggaacaaatatatt
tcccagattgttcagctgggcattcagtctcctgaccgattatttcacgagtatttgtac
cgtgctatgattgatttgggccttgaagatatattgttggagtatggaggtcctgatttg
gtgccgtttctagaaagtgctgtttctggggtaacatcatccagttctccaattggtcac
tcaggaacaagcatcccatccaatcaagccaaatattctgaactgttggcacggtattat
gtctcaaagaggcagcatctgcttgcagctcgtgtattactaagactggcagagaggcgc
tcaagtgacacggtggatgttcctactctagatcaaaggtatcatcacctgagtaatgca
gtcctacaggcaaaaaatgcaagtaacaatgatggcatggtaggttctgctcgaggcgct
tatgatgatgggttgttagatttgctggaaggaaagctttctgtccttcgttttcagata
aagatcaaggaggaacttgaggcttttgcctccaggatagaagctttggctgatgcatcg
gagcctgtccaaagtggaacttctggtgatgccaatcttgcaattattgcacgagaaaag
gccaaggagctatcattagatttaaagaatataactcagctctacaatgaatatgctctt
ccatttgaactttgggagatatgtctagagatgttatacttcgcatactattctggtgat
gctgatagcagcatcgtacgagagacgtgggctagattgattgatcaagctctttcaagg
ggtggcattgctgaagcttgtgcagtattgaagagagttggttctcacatttatcctgga
gatggagctggtttacccttagacacattgtgtctccacctcgagaaagctgcaatggat
cgactggaatcaggggttgaatcggttggagatgaagatgtggcaagggctcttcttgct
gcatgcaagggtgcaaccgagcctgtactgaacacttatgaccagttgttgacaagtggt
gctattttgccatcaccaaaccttaggttacgccttctccgatcagtgctggtagtactt
cgagagtgggcaatgtctgtgtttgcacagagaatgggtactagtgctactggagcttcg
ttaattttaggtggaactttctcgatggagcaaacggcagtcctcaaccaaggggttcga
gataagatctcaagtgcagcaaacaggtacatgaccgaggtacgaaggttggcccttcca
caaagccagactgaagctgttcaccatggctttcgagaacttgaagaatcgctgaccagt
cccttttcttttgatcgtttttga
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