Malus sylvestris (European crab apple): 126596105
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Entry
126596105 CDS
T09027
Name
(RefSeq) SNW/SKI-interacting protein A-like
KO
K06063
SNW domain-containing protein 1
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126596105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msyl03041
]
126596105
Spliceosome [BR:
msyl03041
]
Complex B
Other components
Prp19-related factors
126596105
Complex C
126596105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
126596105
NCBI-ProteinID:
XP_050118540
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All DBs
Position
2:4667825..4669852
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AA seq
592 aa
AA seq
DB search
MAALKQSSASGGDRAATFYDHPNDPWGKQRYGGSAVAEERPAAAVVKHNPIPQYPKRKGF
VPRKVEDFGDGGAFPEVHIAQHPLGMGRNMSKSGTSILPVSVHADGKIAYDALVKQNENS
KKIVYSQYKDLVPKILKNEDEVMVEKDEDEELQKEVEETAAETRAALEKIVNAKLGAAQP
NNVAKQSTDSKLIKYRSSQKSAAFNSGAKERMIKMVEMPVDPLEPPKFKHKRVPRPSGSP
PVPVMHSPPRPVSEKDKKGWNIPPCVSNWKNPKGYTIPLDKRLAADGRGLQDVQVNYDNF
DKFSEALYVAEKKAKEALAMRSKVHEEIIIKVKERKEQEFRELARKARFERIGGVSVSID
PSGKGGMETDMPKETREEREGRLERNKIRKEMHVERERKRRLEAKDGATGKKSRVTTDRD
RDVSEKVALGMANVGGAGGGGGEVMYDHRLFNQEKGMDSGFATDDQYNIYDKGLFAAQPM
LSTLYRSKKDVDSEMYGGADEQLDKIMKTDRFKPDKGFEGTAERASEGRDGPVESEADIF
GLDRLMTKMKNKGEKPTDKVRTGGTMRACACGSSMQDGYQTGSKRRTRIKLF
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggcggctctgaaacagtcttccgcttccggcggcgatcgcgcagcaactttctacgat
cacccgaatgatccgtggggcaagcagcgctatggcggttctgccgtggcggaagaaaga
cctgctgctgctgtcgtcaaacataaccctatacctcaatacccgaagcgtaaagggttt
gttcctaggaaggtagaggactttggcgacggcggtgcgttcccggaggttcacatagct
cagcaccctctaggcatgggcaggaacatgtcgaaatctggaacgagcattcttccagtt
tcagttcatgccgacgggaaaattgcgtatgatgcccttgttaagcagaacgagaactcg
aaaaaaattgtctactcccaatacaaggatctcgtgccgaaaattttgaagaatgaggat
gaggtgatggtcgagaaagatgaggacgaggagttgcagaaggaggttgaagaaactgca
gcggaaacgagagcggcgctggagaagatcgtgaatgcgaaattgggcgctgcacaaccg
aacaacgtggcaaagcagtcgacagactcgaaactgatcaagtataggtcgtcgcagaaa
tcggcggcatttaattctggcgccaaggagaggatgataaagatggtggagatgccagtg
gacccactagagcctccgaagtttaagcacaagcgtgttcctaggccttccggttcccca
cccgtgccggtcatgcattcacctcctcgaccggtgagtgagaaggacaagaagggctgg
aatattcctccgtgtgtttcgaactggaagaacccaaaagggtatacaattccgttggac
aaacgtcttgcggctgatgggagagggcttcaagatgttcaggtgaattacgataatttt
gacaagttttctgaggctttgtatgtagcggagaagaaggctaaagaggcattggctatg
agatctaaagttcacgaagaaattattatcaaggtgaaggaaaggaaggagcaggagttt
agggaattagctcggaaggctcgttttgaaagaattggtggcgtatcggtatccattgac
ccatctggcaaaggaggaatggagaccgatatgccaaaggagacaagggaggaaagagaa
gggaggttggagcggaacaaaattcgcaaggagatgcatgtagagagggaaaggaagaga
aggttggaggcaaaagatggcgcaacggggaagaagagtagggttacaacagatagagat
cgggatgttagcgagaaagttgccctaggcatggctaatgttggaggtgcaggaggcgga
gggggagaagttatgtatgatcataggctgttcaaccaggagaaaggaatggactccggt
tttgccacagatgaccagtacaatatatatgacaagggcttgtttgctgctcagccgatg
ctctcaaccttgtacaggtcgaaaaaagatgttgatagtgaaatgtatggcggcgcggat
gagcagttggataagattatgaagactgatcgcttcaaaccggacaaagggtttgaagga
actgctgagagggcgtcagaaggaagagatggacctgtcgagtctgaagccgatatattt
ggtctagaccggctaatgacaaagatgaagaacaagggcgagaaacccacggacaaggtt
agaacaggagggacaatgagagcatgtgcctgcgggtcttcgatgcaagatggttatcaa
acgggctccaaaagaagaactcgtatcaagcttttctga
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