Malus sylvestris (European crab apple): 126596118
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Entry
126596118 CDS
T09027
Name
(RefSeq) DNA topoisomerase 1 alpha-like
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msyl03032
]
126596118
Enzymes [BR:
msyl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
126596118
DNA replication proteins [BR:
msyl03032
]
Eukaryotic type
DNA Topoisomerases
126596118
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
126596118
NCBI-ProteinID:
XP_050118552
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Position
13:complement(13961760..13968945)
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AA seq
883 aa
AA seq
DB search
MAVQTSTKPNVYEDEDDEPLVFKRCTTKSKPNQLNAEAKKIPAQRQVGQPGKQVSEHRSS
NGLNSSVQKGKMVPSTKSPPVKSPLTSPKASTSSAGASAVSNSKASTSSRASPVPKSPPS
TTLDGHSKRLSEQNKSTTIKKEINSIEHPAQGNSDSEDEKPIGARLGKVKPSEDSDDDKP
LSSRIAPKSKVGTSGSHPYDSKERKLVVSKVQKNGSSTTDKGKAPSVVSSKRPLDKANPS
ENSSAKRLKVSDSSTSVKNKPVAAKQEPKEEDDDDDFIPISQRSKKVASDSKSSLTKQTV
TKVGSFSIKKTIKKSQKASKFTKYSKSTTKPPSSNDGQTKWTTLEHNGVIFPPPYKPHGI
KMLYNGKPVTLIPEQEEVATMYAVMKDTDYVQKETFRKNFWADWHKLLGKNHVIQKLDAC
DFTPIYDWYQNEKEKKKQMSTEEKKALKEEKLKQEEKYMWARVDGNQEKVGNFRVEPPGL
FRGRGEHPKSGKLKRRICPSDVTINIGKNAPIPECPIPGESWKEVRHDNTVTWLAFWNDP
INPREFKYVFLAPSSNLKGLSDMQKYEKARRLKDHIGKIRASYTKDFTSKDVTKRQIAVA
TYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAIPPNSLEFNFLGKDSIRYENTVEVE
TPVYKAIIQFQSGKRGSDDLFDMLDTSRLNAHLKNVMDGLTAKVFRTYNASITLDDILNK
KTKDGDLSEKLVVYQHANKEVAIICNHQRTVSKTHSAQMSKLTEKIDDLQGIVKDLKIDL
DRAKKGKPPLKDADGKQKKNLTPEALERKIAQTNAKIEKMELDMRTKEDLKTVALGTSKI
NYLDPRITVAWCKRHEVPIEKIFNKSLLAKFSWAMPVEPDFRF
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggctgttcagacttctactaaaccgaatgtatatgaagacgaggatgatgaaccttta
gttttcaaacggtgcaccacgaaatctaaacccaatcaattaaacgccgaagcaaagaaa
ataccagctcagaggcaagttggacaaccagggaagcaggtatctgaacaccgttcttca
aatggtctaaactcgagtgttcaaaaaggtaagatggttccatcaaccaaatcaccacca
gtaaaatctccgctaacaagcccaaaagcttcaacttcatctgctggggcatcagcagtg
tcaaattcaaaagcttcaacttcatctagggcatcaccagtacccaaatcaccaccgtcg
actacattagatggtcattctaaacggttatcagaacagaataagtctaccacaattaag
aaggaaattaattctattgagcatcctgctcaaggaaatagtgattctgaagatgaaaaa
ccgataggtgccagactggggaaagtgaaaccttctgaagattcagatgatgataaacct
ttatcatcaaggattgcaccaaagtccaaggtgggaacatcaggcagtcacccttatgat
tctaaagaaaggaagctcgttgtttcaaaagttcagaagaacggttccagcacaacagat
aaaggcaaagctccatctgtggtctctagtaagaggcctctggataaggccaatccttct
gagaactcatcagctaaaaggctaaaagtttcagattcttctacatctgtaaagaataag
ccggtagcggccaaacaagaaccaaaggaagaagatgatgatgatgacttcattccaatt
tcccagaggagtaagaaagttgcatcggatagtaaatcatctctgacaaagcaaaccgta
accaaagttggttcattctcaatcaagaaaacgatcaagaagagccaaaaggcatcaaaa
tttacaaagtattctaaatcgaccacgaagccaccgagctctaatgatgggcagacaaaa
tggacaactttagaacacaatggtgtcattttcccacctccatacaagcctcatgggata
aagatgctttataatgggaagccagtcaccttgattcctgaacaagaggaggttgcaaca
atgtatgcagtgatgaaagatacagattatgtgcaaaaagaaactttcagaaaaaatttc
tgggctgattggcataagttgcttgggaagaaccatgtaattcagaaattggatgcttgt
gattttaccccaatatatgactggtatcagaatgaaaaggaaaagaagaaacaaatgagt
acagaagagaagaaggccttgaaggaggagaaactaaaacaagaggagaagtatatgtgg
gctcgcgttgatggtaaccaagaaaaggttggaaacttcagagttgaaccacctgggtta
ttccgaggtcgtggagagcatccaaagtcgggaaagctgaaaagacggatttgtccaagt
gatgttacaattaatataggaaagaatgccccaattccagagtgtcccatccctggtgaa
agctggaaagaagtaaggcatgacaatacggtcacatggttagctttctggaacgatcca
attaatccaagggaattcaaatacgtgtttctggcacctagtagtaacttgaagggttta
agtgacatgcagaaatacgaaaaagcacggagattgaaggaccatataggaaaaatcagg
gcttcatacaccaaggattttactagtaaagatgtaactaagcggcagatagcagttgct
acctatctcattgataaacttgctctcagggcgggtaatgagaaggatgatgatgaagcc
gatactgttggttgctgcactttaaaagtagagaatgtaaaagcaattccccctaactcg
ttggagtttaacttccttggtaaagactcaatcagatatgaaaatactgttgaagttgag
actcctgtttacaaggcaattatacagttccagtctgggaaacgtggcagtgatgatctc
tttgacatgttggataccagtagattgaatgctcatctaaagaatgtgatggatggcctt
acagcaaaagtgttccgtacctacaatgcatctatcacattggatgacatattgaacaag
aaaaccaaagacggagatctttcagagaaactcgtcgtttatcagcatgcaaacaaagag
gttgccatcatttgtaatcatcagcggactgtctcaaagactcacagtgcacaaatgtcc
aagttaacagaaaagattgatgaccttcagggcatcgtgaaagatctgaaaatagatttg
gacagggccaaaaaaggaaagcccccactgaaagatgctgatggaaagcaaaagaaaaat
ttgaccccggaagcgttggagaggaagatagctcaaacaaatgcaaagattgaaaaaatg
gaactggatatgagaactaaagaggatctgaaaacagtggcattgggaacgtctaaaatc
aactatcttgacccgaggatcaccgttgcttggtgcaagcggcatgaagttccaatcgag
aagatcttcaacaagtcactcctcgcgaagttttcttgggcaatgccagtggagcctgac
ttcagattctga
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