Malus sylvestris (European crab apple): 126596167
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Entry
126596167 CDS
T09027
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00040
Pentose and glucuronate interconversions
msyl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
126596167
Enzymes [BR:
msyl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
126596167
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
126596167
NCBI-ProteinID:
XP_050118637
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Position
13:complement(21813847..21817824)
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AA seq
446 aa
AA seq
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MAVFESKKKWVGAFVTVLLVCCFAAAVVSEISRNSNGGTEELQSSSNSSMAARVAEDDEG
FNKHAVEDPEEIASMVDMSIRNSTERRKLGYFSCGTGNPIDDCWRCDPNWHKNRKRLADC
GIGFGRNAIGGRDGRFYVVTDPNDDDPVNPRPGTLRHAVIQTKPLWIVFKRDMVIRLKQE
LIMNSFKTIDGRGVNVHIANGGCITIQFVTNIIIHGLHIHDCKPTGNALVRSSPTHFGWR
TMADGDAVSIFGSSHIWVDHNSLSNCADGLVDAVMGSTAITISNNHMTHHNEVMLLGHSD
SYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQG
NRYAAPTNPFAKEVTKRVETAATKWKNWNWRSEGDLLLNGAYFTPSGAGASASYARASSL
GAKSSAMVGAITSGSGALPCRRGHPC
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtttgagagtaagaagaaatgggtcggtgcgttcgtgacggtgcttctcgtg
tgttgcttcgcagctgctgtggtctccgagatctctcgcaacagcaatggaggaacagag
gagttgcagagctcgagcaactcgtcaatggcggccagagtggctgaggatgatgaagga
ttcaataagcatgcagttgaagacccagaagagattgcttctatggttgacatgagtatc
cgcaacagcacggagaggaggaagctgggctacttctcctgtggaactggcaatccaatc
gatgactgctggcgctgtgatcccaactggcacaaaaaccgcaagcgtcttgcagactgt
ggcattggttttgggagaaatgccattggtggccgcgatggacgcttctatgttgtcacc
gaccctaatgatgatgatcctgttaaccccaggcctggtactcttcgccatgctgtcatc
cagaccaagcctctctggattgtgttcaagcgagacatggtgatacggttgaagcaggag
ctcatcatgaacagcttcaagaccattgatggtcgcggagtcaatgttcacattgctaat
ggaggatgcatcacaatccaatttgttacaaatattatcatccacggcctgcacatccat
gactgcaagcccactggcaatgctttggtgaggagctcgcctactcactttgggtggcgg
acaatggctgatggagatgctgtctccatcttcgggtcaagccatatttgggttgatcac
aattccctctccaactgcgctgatggtctcgttgatgctgtcatgggctcaactgcaatt
accatttccaacaaccacatgacccaccacaatgaggtgatgctgctgggccacagtgat
agctataccagagacaagcaaatgcaagtcacaattgcttacaaccactttggagaggga
cttatccaaagaatgccaaggtgcaggcacgggtatttccatgtcgtgaacaatgactac
actcactgggaaatgtatgccattggtgggagtgcagaacccactatcaacagccaaggc
aacagatatgctgctccaaccaacccctttgcaaaggaggttaccaagagggtcgagacg
gctgccactaaatggaagaactggaactggagatcagaaggagacctgctgctcaatggt
gcctacttcactccatctggagctggagcttcagcaagctacgccagggcctcaagcttg
ggagccaagtcatctgccatggttggagccataacttcaggttccggtgcacttccctgc
cgcagaggccacccctgctag
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