Malus sylvestris (European crab apple): 126596276
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Entry
126596276 CDS
T09027
Name
(RefSeq) phospholipase D zeta 1-like isoform X1
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00564
Glycerophospholipid metabolism
msyl00565
Ether lipid metabolism
msyl01100
Metabolic pathways
msyl01110
Biosynthesis of secondary metabolites
msyl04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
126596276
00565 Ether lipid metabolism
126596276
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
126596276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126596276
Enzymes [BR:
msyl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
126596276
Membrane trafficking [BR:
msyl04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
126596276
Endosome - Golgi transport
Others
Others
126596276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc
PLDc_2
PH
Motif
Other DBs
NCBI-GeneID:
126596276
NCBI-ProteinID:
XP_050118759
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All DBs
Position
13:complement(12162223..12169990)
Genome browser
AA seq
1108 aa
AA seq
DB search
MESEQLISGGGSRYLQMRSESAMSPSSFLCRLSSFEPARIFDELPSATIVSVSRPDAGDI
SPVLLSYTIEFQYKQFKWRLVKKPSHVFFLHFALKKRAFFEEIQEKQEQVKEWLQNLGIG
DHTDVVQDDEDDETVPLQHDESAKNRDVPSSAALPIIRPALGREQSISERSKVAMQGYLN
HFLGNMDIVNSREVCKFLEVSMLSFSPEYGPKLKEDYVMVKHLPKIPKDDTTRKCCACRW
FNCCNDNWQKVWAVLKPGFLALLAHPFDTQPLDIIVFDVLPTSDGNGDGRVSLAKEIKER
NPLRHTFKVACGSRSINLRVKSGSKVKDWVASINDAGLRPPEGWCHPHRFGSFAPPRGLT
DDGSQAQWFIDGQSAFEAIASAIEDAKSEIFICGWWLCPELYLRRPFHAHASSRLDSLLE
EKAKEGVQIYILLYKEVALALKINSVYSKRKLLGIHENVRVLRYPDHFSSGVYLWSHHEK
LVIVDYQICFLGGLDLCFGRYDTAEHKVGDCPPSIWPGKDYYNPRESEPNSWEDTMKDEL
DRGKYPRMPWHDVHCALWGPPCRDVARHFVQRWNYAKRNKAPNEQAIPLLMPQHHMVIPH
YMGRSQEVEIESKNANNHKEHKRTDSFSSISSCQDIPLLIPQEADGLDSPNEHTKLNGMD
SPHDLLDQPSRVSNNLAFPFRKLKIPPVGPDTPMRGFVDDLDSLSRHGKMASDGVAQSGM
KDPEWWETQERGNKGGFTDESGQVGPCCSCRCQVIRSVSQWSAGTSQVEESIHNAYCSLI
DKSEHFIYIENQFFISGLSGDEIIRNRVLEALFRRIMRAYNDKKPFRVIIVIPLIPGFQG
GLDDAGAASVRAVMHWQYRTICRGHNSILHNLNEILGAKMHDYISFYGLRSYGKLFEGGP
LACSQIYVHSKIMIVDDCTTLIGSANINDRSLLGSRDSEIGLLIEDKEMINSFMGGKPWK
AGKFSLSLRMSLWSEHLGIRATEMNQIIDPIVDSTYKDIWMATAKTNTTIYQDVFSCIPN
DFIHSRAAFRQSIAFWKEKIGHTTIDLGIAPEKIESYQNGDVKTAEPMERLESVKGHLVS
FPLDFMLKEDLRPVFNESEYYASPQVFH
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atggaatcggagcagttaatctccgggggcggatcccgctacctccaaatgcgatcggag
tcggccatgtcgccctcctcctttctctgccgtctctcgtccttcgagcccgctcggatt
ttcgacgagttgcccagcgccaccatcgtctccgtctcccgtcccgacgccggcgatatc
agccccgtgcttctctcttacaccatcgagttccaatacaagcagtttaagtggcgatta
gtgaagaaaccatcacatgtattcttcttgcatttcgcattgaagaagcgtgcatttttt
gaggaaattcaagagaagcaagagcaggttaaagaatggcttcaaaatctaggaatagga
gatcacactgatgtggtgcaagatgatgaggatgatgagactgttcccctgcagcacgat
gaaagcgctaaaaacagagatgttccatctagcgctgctctgccaatcatccggccagcg
ctgggtagggagcaatccatttcggagagatctaaggttgcaatgcaagggtatctaaac
cactttctaggaaacatggacattgtgaactctcgagaggtctgcaagttcctggaggtc
tctatgttatcattttctccagaatatggccctaagctaaaagaagactatgtgatggtc
aagcatcttccgaaaattccgaaggatgatactaccaggaaatgttgtgcatgtcgttgg
ttcaattgctgtaatgacaattggcaaaaggtttgggctgtattaaaaccaggattcttg
gccttgctggcgcatccttttgatacccaacctttagatataatagtatttgatgtacta
ccaacctcagatggcaatggggatggccgggtatcactggcaaaagaaataaaagagcgg
aatcctttacggcatacatttaaggtggcttgtggaagccggagcattaatttgagagtt
aagagtggttccaaagtaaaagattgggttgcctcaatcaatgatgctggacttaggcct
ccagagggctggtgtcatcctcaccgctttggctcttttgcacctccgagaggcttgact
gacgatggcagtcaggctcaatggtttatagatggtcagtcagcatttgaagctattgct
tctgcaattgaggatgcaaaatcagagatatttatttgtggctggtggctgtgtccagaa
ctgtacctgcggcgtccatttcatgctcatgcttcttctagacttgattctttactggaa
gaaaaagctaaggaaggggttcagatatacattcttctctataaagaggtagctcttgct
ctgaaaatcaacagtgtttatagcaagagaaaactactcgggattcacgagaatgtgagg
gtactacgttatcctgaccacttctcaagtggtgtttacttatggtcccaccatgaaaaa
cttgtcattgttgattatcagatttgctttcttggaggattggatttatgctttggtcgt
tacgatactgctgagcataaagtgggtgattgccctccttcgatatggcctggaaaagac
tattacaacccaagggaatctgaaccaaattcgtgggaggatacaatgaaagatgagttg
gatcgtggaaaatatcctcgtatgccttggcatgacgttcactgtgccctttggggacca
ccctgccgtgatgtggctagacattttgttcagcgctggaactatgcaaagagaaataag
gctccaaacgaacaagcaattccactacttatgccgcagcaccacatggtcattcctcat
tacatgggaagaagccaagaggtggagattgaaagtaagaacgctaataatcacaaagag
cataaaaggacggattccttctcgtcgatatcatcctgtcaagatattccacttcttata
ccccaagaagctgatgggctggattctccaaatgaacacacaaaactaaatgggatggac
tctccccatgatctccttgatcagccaagcagggttagcaacaatcttgctttccctttc
cggaagttaaaaattccaccagtaggtcctgatacgccaatgagaggctttgtagatgac
ctagattctctgtctcgacacggaaaaatggcttctgacggggtggcacagtctggcatg
aaagatccagagtggtgggaaacacaagaacggggcaacaagggtggtttcacagatgaa
tcgggacaagttggcccttgttgctcgtgtcgatgtcaggttattagaagcgtcagtcag
tggtcagcaggaacaagccaagttgaagagagcattcacaatgcttattgctctcttatc
gacaaatcagagcactttatttacattgagaaccaatttttcatatcaggtctttcagga
gatgaaattatacggaatcgtgttttagaagcattatttcgccgtatcatgcgagcatac
aatgataaaaagccttttagagttataattgtgataccgcttatacccggcttccagggg
ggtctggatgatgctggtgcagcatctgtaagagctgttatgcattggcaatatcgaacc
atttgcagaggacataattcaatattgcacaatcttaatgaaattcttggtgcaaagatg
catgattatatttccttctatggccttagatcttatggtaaactctttgaaggcggtccg
ttggcctgtagtcagatctatgtgcatagtaaaattatgattgtcgatgattgcacaact
ctaattggatcagctaacatcaatgataggagtttgcttggttcaagagattctgagatt
ggtctacttattgaagataaagagatgattaattcatttatgggaggaaagccatggaag
gctggaaagttttcattgagtcttcgcatgtcactgtggtctgaacacctcggtattcgt
gccacagagatgaatcaaataatcgacccaattgtcgattcaacttataaggacatctgg
atggcaactgcaaagacaaataccacaatctaccaagatgtgttttcttgcataccaaac
gattttatacattccagggctgcattcaggcaaagtatagccttctggaaggagaaaatt
gggcacacaactatcgacttgggaattgctcccgagaagatagaatcatatcaaaatggg
gatgtgaagacggcagaacccatggagaggttagaatctgtgaagggccatctggtttct
tttcctttggatttcatgttgaaggaagatctacgacctgtgttcaatgaaagtgagtat
tacgcgtctcctcaagtatttcattga
DBGET
integrated database retrieval system
