KEGG   Malus sylvestris (European crab apple): 126596282
Entry
126596282         CDS       T09027                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl03010  Ribosome
msyl04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    126596282
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    126596282
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:msyl03011]
    126596282
   04121 Ubiquitin system [BR:msyl04121]
    126596282
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:msyl04147]
    126596282
Ribosome [BR:msyl03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    126596282
  Archaea
    126596282
Ubiquitin system [BR:msyl04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   126596282
Exosome [BR:msyl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   126596282
  Exosomal proteins of colorectal cancer cells
   126596282
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Plexin_RBD Dsc3_N TBK1_ULD Ubiquitin_5 UBL_UBAC1 DUF2604 Thioredox_PDIA6_C Fer2_3 OTU1_UBXL
Other DBs
NCBI-GeneID: 126596282
NCBI-ProteinID: XP_050118766
LinkDB
Position
13:6301447..6302138
AA seq 156 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDDSGKVQRLRKE
CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAGGD
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaaaaccctaacgggtaagaccataaccctagaggtcgagtcctct
gacaccatcgacaatgtcaaggccaagatccaagacaaggagggcatccccccggaccag
cagcgcctcatcttcgccggcaagcagctcgaggacggccgaaccctcgccgactacaac
atccagaaggagtccaccctccacctggtgctccgcctccgcggtggcgccaagaagagg
aagaagaagacctacaccaagcccaagaagatcaagcacaagcacaagaaggtgaagctc
gcagtgctccagttctacaaggtggatgattccggcaaggtccagaggctgcggaaggag
tgccccaatgccgagtgcggcgctggaactttcatggcgaaccacttcgacaggcactac
tgcggcaagtgcggattgacctatgtttaccagaaggctggcggtgattag

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