Malus sylvestris (European crab apple): 126596283
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Entry
126596283 CDS
T09027
Name
(RefSeq) autophagy-related protein 11-like
KO
K08330
autophagy-related protein 11
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
126596283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126596283
03029 Mitochondrial biogenesis [BR:
msyl03029
]
126596283
Membrane trafficking [BR:
msyl04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Scaffold protein
126596283
Mitophagy
Scaffold proteins
126596283
Mitochondrial biogenesis [BR:
msyl03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
126596283
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG17_like
ATG11
FliD_C
Fer4_21
DUF488-N3i
IKKbetaNEMObind
Motif
Other DBs
NCBI-GeneID:
126596283
NCBI-ProteinID:
XP_050118767
LinkDB
All DBs
Position
13:29205923..29221717
Genome browser
AA seq
1158 aa
AA seq
DB search
MSSSTAEGLVHQGKLLVHIAENGHSFELDCEGTTLVEVVMRYIESMAGINLNDQLVLCLD
MKLTPQRPLSAYNLPADGREVFIFNKARLQTNSSLPPPEQVDILDTADPQSPSASHDPHP
LDDALDPALKALPSYERQFRYHYHKGHAIYSRTQVKYENCERLLMEQKVQERAVEVARGN
LDQYYKMINQTYTEFMKRYSQQHRSHSDLLINLWRDVEKLRSVKLHPALETATWKCLSDF
VKEETLRKAGEICSSSHRQFENKVSQFKQMFSEVKQKVEELFSNRASLPIRHLELTIKDH
QRYIHEQKSIMQSLSKDVNTVKKVVDDCLSCQLSSSLCPHDAVSALGPMYDVHDKNHLPR
MQACDHAISKLLDFCKDKKNEMNVFLHNYMQKIAYISYIIKDAKLQFPVFREAMVRQEDL
FLDLKLVRGIGPAYRACLAEIVRRKASLKLYMGMAGQLAERLATKRETEVRRREEFLKDH
SLYIPRDVLASMGLYDTLNQCDVNIAPFDTSLLDIEISDIDHYAPEYLTPLSSKSAFRGS
YFMSNETCHLVGADESTLDNLENCDSEELLEGGELVEIAGTGKLEVENAKLKAELASAIA
VICSFWPEVDFESLDDSKVDNLLKSAAEKTTEALHLKDEYGKHLQSMLRVKQMQCLSYEK
RIQELEQRLSDQYLQSQKISNDKDASEFGILSDKVDDCKQEIIGGREAHMPCSSNTEPMD
EVSCVSSVLDAKLGLFNVQPGKMRDGVDKNMMDSSAVRNHLMDSSMQNHPLDSSMQELRR
EELLASGKDGKEKMVGQLGMSLTNSSTAESMPEPLNVIPCETAIDPGLNTKVSAELLLEL
QTALSEKSNQLSETEIKLKATMEDVSILKRELDTNRKLLDESQMNCARLENCLHEAREEA
QTHLCAADRRASEYSALRTSAVKMRGIFERLRSCVYAQGGVASFNESLHTLAQSLGNSIN
GSEDDGTVEFRKCIRALADRVGFLSRHREELLDKYPKVEAVNEQLRKDLEEKKGLVKTLY
TKHQLEKQANKEKISFGRLEVHEIAAFVLNTYGQYEAISRNCSNYYLSAESVALFTDHLP
NQPNYIVGQIVHVERQTVKPLAPSSTRSENNLTSDMETDRLTLNSGLNPYGLPIGCEYFV
VTVAMLPGTTTIHTPPPS
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaagtacggctgaaggtttggttcatcagggcaagcttttggttcatattgct
gagaatgggcattcatttgagcttgattgtgaaggaaccacactggtagaggtagttatg
cggtatattgaatctatggctgggattaatctcaatgaccagcttgttctgtgtttggat
atgaaacttacgccacagaggccgctttcagcttataaccttccagctgatggtcgggaa
gtgtttatattcaataaagcaaggctgcaaactaattcttcgctccctccacctgagcaa
gttgatattcttgacactgctgacccccagtcaccgtcagcttcacatgaccctcaccct
ttggatgatgctttggaccctgctttgaaggccttgccttcttatgaaaggcaatttagg
taccactaccacaagggtcatgcaatttacagtcgtacccaagtaaaatatgagaactgt
gagaggcttttgatggagcagaaggttcaagagagggcagtggaggttgctaggggtaat
ttggatcaatattataaaatgataaaccaaacctatacagaattcatgaagcgttattcc
caacagcatcgaagtcattctgatcttttgatcaatctctggagggatgtagaaaaactg
agatctgtcaagcttcaccctgcattagagactgccacttggaagtgcctatcggatttt
gtgaaggaagagaccttgaggaaagcgggagaaatttgtagcagttcccacaggcagttt
gagaataaggtttcacagtttaagcagatgtttagtgaggtaaagcagaaagtcgaagaa
ttgttttctaacagggcttcactgcccattaggcatttggaactcacaattaaggatcac
caaagatatattcatgagcaaaagagtataatgcaatctttgagcaaagatgtaaatact
gtcaagaaagtcgtggatgattgcttgtcttgccaattgtcatcctcactttgtccacat
gatgcagtttcagccttgggccctatgtatgatgtccatgataaaaatcacctgcctagg
atgcaggcttgtgatcatgcaatttctaagctcctcgacttctgcaaggataaaaagaat
gaaatgaacgtatttctccataattatatgcaaaagatagcatatatttcttacataatt
aaagatgcaaaattacaatttcctgtttttagagaggcaatggtgcgtcaagaggatcta
tttttggacttaaaactggttcgtgggattggccctgcatatagagcctgcttagcagaa
atagtcagacgaaaggcttccttgaagctttacatggggatggctggacagttggctgaa
agacttgcgacaaaaagggagactgaagtcaggagacgggaggagtttttgaaagatcac
agtttatacatacccagggatgtattagcatccatgggattatatgataccctcaatcag
tgtgatgtcaacatagctccttttgatactagcttgcttgatattgagatttcagacatt
gaccattatgctcctgagtacttgactccactgtcttccaagagtgcgtttagaggttca
tattttatgtctaacgaaacttgtcatttggttggtgctgacgagagtacattggataac
cttgagaattgtgactctgaggagctacttgaaggcggtgagttggtagagattgctgga
acaggtaagttagaagttgagaatgcaaaattgaaagcagaactggcttctgcaatagct
gtgatctgttcattctggcctgaagtagactttgaatcattggatgatagtaaagtggat
aatttattgaaaagtgccgcagagaagacaactgaagccttgcacctgaaagatgaatat
ggaaagcatctacaatctatgcttagggtgaagcagatgcagtgtctttcatatgagaaa
cgcattcaagaacttgagcagagactgtctgatcagtatttgcaaagccagaagatttca
aatgataaggatgcctctgaatttggaattttgtctgataaggttgatgactgcaagcaa
gaaatcataggtggtagggaagcccatatgccttgctcatctaatactgagcccatggat
gaggtttcctgtgtttctagtgttttggatgcaaaattgggtctgttcaatgtgcaacct
ggaaaaatgagagatggggtagataagaatatgatggattcttcggcagtacgaaatcat
ctaatggattcatccatgcaaaatcatccactggattcatccatgcaagagctacggcgt
gaagaactgctggccagtggtaaagatgggaaagaaaagatggtggggcagctgggcatg
tcactgacaaacagttctactgctgaaagcatgcctgaacctcttaatgttataccgtgt
gaaacagcaattgacccaggcttgaacaccaaagtcagtgcggagctgttgttggaattg
caaaccgcactttcagagaagtcaaaccagttgagtgaaacagaaattaagcttaaagct
actatggaggatgtttctatacttaagagggaattggacacaaatcggaaactccttgat
gaatctcagatgaattgtgctcgcttggagaattgtttgcacgaggcaagagaggaagct
caaacccatctttgtgcggctgatcgcagggcctcggagtatagtgcgctgcgcacatct
gctgtgaaaatgcgtggcatcttcgaaagattaaggagctgtgtatatgcccagggtggg
gtagctagttttaatgaatctttgcacaccttggcacaatctctgggcaattctattaac
ggcagtgaagatgatggtactgttgaatttcggaaatgtattcgggctctggcagataga
gttggtttcttgtcaaggcaccgtgaagagctgcttgacaagtatccaaaggttgaagct
gtaaatgaacaacttagaaaggatttggaagagaagaaggggctggttaaaactttgtac
acaaagcatcaacttgagaagcaggcaaacaaagagaagatatctttcggccgcttggaa
gtccacgagattgctgcatttgttctaaacacatatgggcagtacgaggcaattagtcgt
aattgctccaactactacctgtctgctgaatctgtagccttgtttactgatcatctccca
aatcaacctaactacattgttgggcaaattgtgcatgtcgaacggcagaccgtgaagcca
ttggctcctagttcaacgcggtctgagaacaacctaacatctgacatggaaaccgaccgg
ttgaccttgaattcaggattgaacccgtatggtctccctattggctgtgaatacttcgta
gtgacagtagccatgttacctggtaccaccaccattcataccccacctccttcctga
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integrated database retrieval system
