Malus sylvestris (European crab apple): 126596320
Help
Entry
126596320 CDS
T09027
Name
(RefSeq) threonine--tRNA ligase, mitochondrial 1-like
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
126596320
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
msyl01007
]
126596320
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msyl03016
]
126596320
Enzymes [BR:
msyl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
126596320
Amino acid related enzymes [BR:
msyl01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
126596320
Transfer RNA biogenesis [BR:
msyl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
126596320
Prokaryotic type
126596320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
tRNA-synt_His
Motif
Other DBs
NCBI-GeneID:
126596320
NCBI-ProteinID:
XP_050118828
LinkDB
All DBs
Position
13:complement(5834149..5843022)
Genome browser
AA seq
726 aa
AA seq
DB search
MQLVSLSKTWPPAAAAISFFLRRNSYSPFSSLSTSPPPPLLPQLPTDSAAMAPHPKDDAY
IEAVIPKRIKLFEAIQAQQLAHRQSLPSDPIKITLPGGQEKEGKRWVTSPFDIAKDISKS
LASSAVIAKVNGDLWDMSRPLEGDCELKLFKFEDDEGRDTFWHSSAHILGQALEVEYGCK
LCIGPCTTRGEGFYYDAFYGDLGLNDEHFKDIASAADKAVKGKQPFERIEVTREQALELF
SDNQFKVEIINDLPADNTITVYRCGPLVDLCRGPHIPNTSFVKAFACLKASSAYWRGNKD
RESLQRVYGISYPDKKSLQLYIQKLEEAKKYDHRLLGTKQELFFCHPLSPGSWFFLPNGT
RIYNKLMEFIKNQYRERGYKEVISPNMYNMQLWETSGHAANYKENMFVFEIEKQEFGLKP
MNCPGHCLMFQHRVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRES
QVKDEVKGVLDFIRYTYNIFGFSFDLKLSTMPEKHMGDLATWEKAEAALADALNEFGKPW
QINEGDGAFYGPKIDISVSDALNRKYQCATLQLDFQLPQKFELNYSAEGEEGKLERPVMI
HRAVLGSVERMFAILLENYKGKWPFWLSPRQAIVCPVSDKSQPYALEVRDSIHQAGYYVD
VDTTDRTIQKKVREAQIAQYNYILVVGEEEVKTGQVSLRVRDKGDVTVMTMDNLLQHFKA
EVEAFH
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgcagctggtctccctttctaaaacctggccgccagcagcagcagctatctctttcttt
ctccgccgtaactcctactccccattctcctcactctccacttctcctcctcctcctctt
cttccccagctccctacggacagcgccgccatggcgccccacccgaaagacgacgcgtat
atcgaggccgtaatcccgaagcgcatcaagctcttcgaggccatccaggcccagcagctc
gcccaccgccagtccctcccctccgatccaatcaagattactttgccgggcggacaggag
aaggaagggaagaggtgggtgacttcgccatttgacattgccaaggatatttccaagagc
ttggcttccagcgctgtgattgcaaaggtcaatggggacctgtgggacatgagccgtcct
ctggaaggggactgtgagcttaagctcttcaagtttgaagacgatgaagggcgtgatact
ttctggcattctagtgctcacattctcggacaggcacttgaggttgagtatggatgcaag
ctctgcattggtccgtgcactactagaggagagggtttctattacgatgcgttctacggc
gatttgggcttgaatgacgaacacttcaaggacattgcatcagcggcagataaggctgtt
aagggtaaacaaccttttgagcgtattgaagtcacaagagaacaagctcttgagcttttc
tctgataatcaattcaaggttgaaatcatcaatgatcttccggcagacaatactataaca
gtatatagatgtggccccttggttgacttgtgtcgtgggccccatataccaaatacttct
tttgtcaaagcatttgcatgtttgaaggcttcttcagcctactggaggggaaataaagat
cgtgaaagtttacagagagtctatggaatatcatatcctgataagaaaagtttgcagcta
tatatccagaagctggaagaagcaaaaaagtatgaccacagactgttgggtacaaagcag
gagctctttttttgtcacccacttagcccaggaagttggttcttcctccctaatggaact
cggatttataacaaactaatggagtttataaaaaatcaatatagagaacgaggctataaa
gaggttatatcaccaaacatgtacaatatgcaactttgggaaacatctggtcatgctgct
aattacaaagagaatatgtttgtatttgagattgagaaacaagaatttggattgaagcca
atgaattgcccagggcattgtttgatgtttcagcatagggttcgctcgtatagagaactt
ccacttagactggctgattttggtgttttgcatcgcaatgaggctagtggtgcactgact
ggattaacacgagtacggagattccagcaggatgatgcccatatcttttgcagggagtcc
caagtgaaagatgaagtaaagggtgtcttagatttcatccggtatacttataatattttt
ggcttttctttcgatctgaagctatcaacaatgccagaaaaacacatgggagatctggca
acatgggagaaagctgaggctgctcttgcagacgcattaaatgagtttggcaagccctgg
cagataaatgaaggggatggtgcattttatggaccaaaaatagatatcagtgtatctgat
gcactgaacagaaaatatcagtgcgcaactctacagcttgattttcagcttccacaaaaa
ttcgagctgaattactctgcagagggggaagaaggcaagttggagagacctgttatgata
cacagagctgttttaggctccgttgagcgtatgtttgctatactgttggagaactacaaa
ggaaagtggcccttctggcttagtccacgtcaggcaattgtttgccctgtctcagacaaa
tcccaaccttatgctctggaggttcgggatagtatccatcaagctggttattatgttgat
gttgacactactgatagaaccattcagaaaaaggtacgagaagctcagatagcacagtac
aactacattttagttgtgggcgaggaagaagtcaagactggacaggtgagcttacgggtg
agggacaagggagatgtcaccgtaatgactatggacaatctactccagcacttcaaggcc
gaagtcgaagcgttccattag
DBGET
integrated database retrieval system
