Malus sylvestris (European crab apple): 126596357
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Entry
126596357 CDS
T09027
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00040
Pentose and glucuronate interconversions
msyl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
126596357
Enzymes [BR:
msyl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
126596357
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
126596357
NCBI-ProteinID:
XP_050118870
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Position
13:complement(7240309..7242484)
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AA seq
402 aa
AA seq
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MAMPLSLLLILSLLLIPTTISSSPVKDPELVMQQVQESINASRRNLGYLSCGTGNPIDDC
WRCDPNWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDSGDHPVNPKPGTLRYGVIQNEP
LWIVFQRDMTINLKEELMMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKQ
GGNAYVRDSPEHFGWRTLSDGDGVSIFGGSHVWVDHNSLSNCRDGLIDAIHGSTSITISN
NYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGNFHVVNNDYTHWE
MYAIGGSASPTINSQGNRFLAPNDRFNKEVTKHEDAPQKEWSKWNWRSSGDLLLNGAFFT
ASGAGASSSYAKASSLGARPSSLVSSLTAGAGSLRCKKGSRC
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgccactctcccttttgctgatcctctctctcctcctaatcccaacaaccatt
tcctcctccccagtcaaagatcctgaactggtgatgcaacaagtacaagagagcatcaat
gcctcaaggagaaatttgggttatctttcatgtggcaccggaaaccccattgacgactgc
tggaggtgtgaccccaactgggagaagaaccgccagcggctagccgactgcgcaatcggg
ttcggaaagcacgccattggcggcagggacggtaaaatctacgtggtcacggactcaggc
gaccatccggtgaaccctaaacccggtaccctccgatacggcgtgatccaaaacgaaccg
ctctggatcgtattccagcgtgacatgacgatcaatctgaaagaagaactgatgatgaac
tccttcaagaccatcgacggcagaggagccagcgtccacattgccggtgggccctgcatt
accatacagtacgtgaccaacattatcatccacggattaaacattcacgactgcaagcaa
ggcgggaacgcctatgtgagggactcgccggagcattttgggtggcggacgctttccgac
ggagacggggtttccatttttggtggtagtcatgtttgggtggatcataactctctttcg
aactgccgtgacgggctcattgatgccatacacggttccacttccatcaccatttctaac
aattacatgacgcatcatgacaaggtcatgctcttggggcacagtgattcctacactcag
gacaagaatatgcaggtcaccattgcattcaaccactttggagaaggccttgttcagagg
atgccaagatgtagacatgggaactttcatgtggtgaacaatgactacacccattgggaa
atgtatgctattggcgggagtgcttctccaaccatcaacagccaaggcaacagatttcta
gcaccaaatgatagattcaacaaagaggtcaccaagcatgaggatgcgccacagaaggag
tggagcaaatggaactggaggtcctcgggagatttgctgctaaacggtgcgttcttcaca
gcatccggtgcaggagcatcttctagttacgccaaggcatcgagcttgggtgcgagaccg
tcgtcgctcgtgagttcactcactgccggagctggttcgctcaggtgcaagaagggctcg
cgttgctga
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