Malus sylvestris (European crab apple): 126596424
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Entry
126596424 CDS
T09027
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2-like isoform X1
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
126596424
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
msyl01002
]
126596424
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126596424
Enzymes [BR:
msyl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
126596424
Peptidases and inhibitors [BR:
msyl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
126596424
Ubiquitin system [BR:
msyl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
126596424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
126596424
NCBI-ProteinID:
XP_050118966
LinkDB
All DBs
Position
13:complement(40346000..40361946)
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AA seq
976 aa
AA seq
DB search
MGKKVKKKATAPPREKLVAADSPKKAPQPCNASVKDGDNGVSVAKERRPCPHVDKGVNLD
KLSAKIGSSGPVRCEYCREGALDRRGGKGKGKHGKKKGSSSVDSKSESKAIWVCLECGHY
SCGGFGLHTTPQCHAVRHARQTHHPIVIHFEKLQMRWCFPCNMLITIDKTEEDGEQKDVF
ADVVKLIKGHSSEESLVNAEDVWFVSGSVTSEIKSASNISCDLDGRVGYTVRGLVNLGNT
CFFNSVLQNLLAMDRLRGYFLNLDASTGALTVSLKKLFTEAKPESGVKNVINPRSLFGCL
CSKAPQFKGYQQQDSHELLRCLLDGLCIEELSTRKRINSSQENGNPSNSGPTFVDTAFGG
QIASTVCCVECGHSSTVYESFLDLSLSVPTRKSPSKTAQPTSRTKKMKLPPKKSGKFRSK
NNKEKNSVPSPSVPTPSTSSEVSEQKELVVNSLSAVQESADDVCEDAAEQTSPLLDDCSW
LDYLDSGNMLDDNDLSSQHNDISIVQDSEKKNTHLNDVSLQSGSESSNQVFTPNGEPNVK
PDFSSVNSREEELPLQVLDSEVLLLPYKAECSITEEIMGGEGEASSLVVGCGQDDFGFGD
LFNEPEVYGPPRRPSVGEGGTDTSIIASESDPDEVDDTVSPVSVESCLAHFIKPELLASE
NAWHCENCSKTLPSQKLEDKKQVKSAARVLLNGCETRTQSDSLSLNTGPWPANVRTLGNG
NVKSNTGCNQFGENLILHDGKINCLSQNCSAVENGQSHKLNSVVCRRQDEIKDAPPVQSN
TSDCNNACSLESFSDQVIDSRADESRSASFTSDTVPQTNDGILDGHRESEESEDEEINAK
RVNLKRNATKRYLINRAPPILTIHLKRFSQDARGHLSKLNGHVSFREKFDLRPYMDSSST
DGEKYEYQLLGVVEHSGTMRGGHYVAYVRGGERGRGKAEKENIGHMWYYASDAHVRQVSL
DEVLRSEAYILFYEKV
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaagttaagaagaaggctacagctcctccaagggagaagttggttgcagcc
gactccccaaaaaaagctccccaaccatgcaacgcaagtgttaaggatggtgacaatgga
gtttcagttgcgaaagagagaaggccttgtcctcatgttgacaaaggtgtaaatttggat
aaattgtctgctaaaattgggtcttcaggacctgttaggtgtgaatattgcagggaagga
gcgcttgataggaggggtggtaaaggaaagggaaaacatgggaagaagaaagggagctcg
tccgtggattcaaaatcggagtccaaagccatttgggtttgtttggagtgtggtcattat
tcttgtggtgggtttggacttcatacaacccctcaatgccatgcagttcggcatgctagg
caaactcatcacccaatagtgatccactttgaaaagctgcagatgcgatggtgcttcccg
tgcaacatgcttattacaattgacaagacagaagaggatggtgaacaaaaagatgtgttt
gcggatgttgttaaattgataaagggtcattcatcggaggaatcattggttaatgctgag
gatgtgtggtttgtgagtggcagtgtgacaagcgaaatcaaatcagctagcaatatatca
tgtgatttggatggaagagttggttatacagtgagaggcttggttaatcttggtaacact
tgcttctttaattctgtcttacagaaccttctagccatggataggttgcggggctacttc
ttaaatttagatgcatctactggagctcttactgtttccttgaagaaactctttactgaa
gcaaaaccagagtcaggagttaagaatgtgataaacccaaggtcactttttgggtgtctt
tgttccaaggctccccaatttaaggggtatcagcagcaagacagccatgaattgcttcgt
tgcttactggatggattgtgcatcgaggagttgagtacgaggaaacgtataaattcttct
caggaaaatgggaatccttcaaattcaggtcctacttttgtggatactgcatttgggggc
caaatagcaagtacagtttgctgtgtcgaatgtggtcactcctcaactgtgtacgagtca
tttttagatctgtcattgtcagttccaaccagaaaatccccatctaagactgcccaaccc
acctctcgaacaaagaagatgaagttgccgcccaagaagagtggaaagtttcggtctaaa
aataacaaagagaagaattctgtaccatcaccaagtgttccaaccccatcaaccagcagt
gaggtttctgaacaaaaggaattagttgtaaatagtctatctgctgtccaagaatctgca
gatgatgtctgtgaggatgcagcagagcaaacatcacctttgttagatgactgttcatgg
ttggattatcttgattcgggaaatatgttagatgacaatgatttatcttcgcaacataat
gatatttcaattgttcaagattctgaaaaaaaaaatacacatcttaatgatgtctcttta
cagagtggctctgaatctagtaatcaggtttttacgcctaatggggaaccaaatgtaaaa
cctgacttttcttcagtgaattctagggaggaagagctcccattacaggttctggattct
gaagttttgttgcttccgtataaagcagagtgttctatcactgaggaaatcatgggaggc
gaaggtgaggcctcctccttggttgtgggttgtggacaagatgactttggctttggggat
ttattcaacgaacctgaagtttatggcccccctagaagaccctctgtaggtgagggtggc
acagacactagtatcatagctagcgagtctgatccagatgaagttgatgatactgtttct
ccagtgtctgtagagagttgtttggctcatttcataaagcctgagcttcttgccagtgaa
aatgcttggcattgtgagaactgttccaaaactcttccaagccaaaagttggaagacaag
aagcaggtaaaatctgctgctagagttttgttaaatggatgtgagactagaacacaaagt
gattcactgagtttaaatacgggtccgtggcctgccaatgtcagaacgcttggtaatggg
aatgtcaaaagcaatactggttgtaaccagtttggtgaaaacttgattttgcatgatgga
aaaataaattgcttgagccaaaattgctcagcagttgagaatggtcaatcacataagttg
aattctgttgtttgtcgacgacaagatgagattaaagatgctcctccagtgcaatcaaat
acttcagattgcaataacgcttgcagcctagaaagtttcagtgatcaagtcattgattct
agggctgatgagtctagaagtgctagtttcacctctgacactgtaccgcagactaatgat
gggatattggatggacaccgtgaatcagaagaaagtgaggatgaggaaataaatgccaaa
cgtgtgaatttgaagaggaatgcgactaaaaggtacctcatcaacagggccccaccgatt
ttgactattcatctcaagaggttcagccaagatgctcgtggtcacttgagtaaattgaat
ggccatgtcagttttcgagaaaaatttgatcttaggccatatatggattccagttccaca
gatggggagaagtatgaataccagctattgggggttgtggagcattctggaaccatgaga
gggggccactatgttgcatacgtgagagggggtgaaaggggcagaggaaaagctgagaaa
gaaaatatcggtcatatgtggtattatgctagtgatgcacatgtgcgtcaggtttcccta
gatgaggttcttcgctctgaggcctatatcttattctatgaaaaagtttga
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