Malus sylvestris (European crab apple): 126596563
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Entry
126596563 CDS
T09027
Name
(RefSeq) LEC14B homolog isoform X1
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126596563
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
126596563
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
EIF3I
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_WDR41
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_Aladin
Beta-prop_ACSF4
Beta-prop_HPS5
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
126596563
NCBI-ProteinID:
XP_050119145
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Position
13:13889426..13894546
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AA seq
475 aa
AA seq
DB search
MSYRARFGNDNSACDSGNSAEGSGSSKGPDEVSNDFDHEIAQLTKHRSRPHRLLSGDMAG
KSRLPVSTMKMLAGRESNYSGRGRFSLADCCHVLSRYLPINGPWGVDQSRSPAYVSQFSN
DGLAFVAGFQGGHIRIYNVEKGWKVQKDILTKTLRWTITDTSLSPDQRYLVYASMTPVVN
IVNVGSSTTVSVANVMEVHEGLDFSIEGDEDEFGIFSVKFSTDGRELVAASSDASIYVYD
LQANKVSLRIPAHQSDVNTVCFADETGHLIYSGSDDNLCKVWDRRCLMTYGQASGVLMGH
LEGVTFIDSRGDGRYLISNGKDQTTKLWDIRKMSSRAMYSPRLTDRDWDYRWMEYPAHAR
TLKHPNDQSLATYRGHAVLRTLIRCYFSPAYSTGQKYIYTGSSDHSVYIYDLVTGAQVAK
LDHHEGPVRDCSWHPLYPILVSSSWDGTVARWEFPGDDQVPTLVRPKIRRRRGFY
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagttacagagcgaggtttggtaacgataatagcgcctgtgatagcggaaattctgct
gaaggttccggttcaagtaaaggacctgatgaagtatccaatgattttgatcatgaaatt
gctcaactcactaagcatagatcaagaccccaccgacttttgagcggggatatggctggg
aagtcgaggttaccggtttcaacgatgaaaatgctggccggccgtgaaagtaattattca
gggcggggaagattctcgttggcagattgttgccatgttttgagccggtatctgcccata
aatggtccttggggggtggaccagtccagaagtcctgcttatgtttctcaattttcgaat
gatggtttggcttttgttgctggatttcagggaggccatattagaatatataatgttgaa
aagggatggaaggttcagaaggatatcctgaccaaaaccttgagatggactattaccgat
acatctctatcaccggaccaacgttatcttgtttatgctagcatgacaccggttgtcaat
attgtgaatgtgggatcttcgacgacggtgtcagttgcaaatgttatggaagttcatgaa
ggtctggatttttctattgaaggcgatgaggatgaatttggaattttctcagttaaattt
tcaactgatgggcgagagcttgttgctgcaagtagtgatgcttcaatatatgtttatgat
ctccaagcaaataaagttagcctccgaataccagctcaccagtctgatgtaaacactgtg
tgctttgctgatgagaccggccatctcatatattctggcagtgacgacaacctctgtaag
gtgtgggacagacgctgcttaatgacgtacggacaagcatctggggtcctgatgggacat
cttgaaggtgttacatttattgatagccggggagatgggcgttacttaatatcaaacggg
aaggaccagacaaccaaactctgggatataagaaagatgtcctctagagccatgtacagc
ccaaggcttacagatcgtgactgggattacagatggatggagtacccagctcatgcaaga
actctgaaacatccaaatgatcagtcattggctacatatagaggccatgcagtcctgcgc
actttaattcgctgttacttttctccagcatatagtactggacaaaagtacatctacact
ggctcaagtgatcattccgtctatatatatgatctggtaaccggagctcaagttgcgaaa
ctagatcatcatgaaggacctgtgagagactgtagttggcatcctctgtatcccattttg
gtcagctcgtcttgggacgggaccgtcgcccgatgggaatttcctggtgatgaccaagtt
cccaccctcgtgaggccgaaaatacgccggaggagaggcttctattga
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