KEGG   Malus sylvestris (European crab apple): 126596563
Entry
126596563         CDS       T09027                                 
Name
(RefSeq) LEC14B homolog isoform X1
  KO
K11801  DDB1- and CUL4-associated factor 11
Organism
msyl  Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:msyl04121]
    126596563
Ubiquitin system [BR:msyl04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     126596563
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd EIF3I WD40_Gbeta WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_EML ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_WDR41 Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_ACSF4 Beta-prop_HPS5 WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 126596563
NCBI-ProteinID: XP_050119145
LinkDB
Position
13:13889426..13894546
AA seq 475 aa
MSYRARFGNDNSACDSGNSAEGSGSSKGPDEVSNDFDHEIAQLTKHRSRPHRLLSGDMAG
KSRLPVSTMKMLAGRESNYSGRGRFSLADCCHVLSRYLPINGPWGVDQSRSPAYVSQFSN
DGLAFVAGFQGGHIRIYNVEKGWKVQKDILTKTLRWTITDTSLSPDQRYLVYASMTPVVN
IVNVGSSTTVSVANVMEVHEGLDFSIEGDEDEFGIFSVKFSTDGRELVAASSDASIYVYD
LQANKVSLRIPAHQSDVNTVCFADETGHLIYSGSDDNLCKVWDRRCLMTYGQASGVLMGH
LEGVTFIDSRGDGRYLISNGKDQTTKLWDIRKMSSRAMYSPRLTDRDWDYRWMEYPAHAR
TLKHPNDQSLATYRGHAVLRTLIRCYFSPAYSTGQKYIYTGSSDHSVYIYDLVTGAQVAK
LDHHEGPVRDCSWHPLYPILVSSSWDGTVARWEFPGDDQVPTLVRPKIRRRRGFY
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgagttacagagcgaggtttggtaacgataatagcgcctgtgatagcggaaattctgct
gaaggttccggttcaagtaaaggacctgatgaagtatccaatgattttgatcatgaaatt
gctcaactcactaagcatagatcaagaccccaccgacttttgagcggggatatggctggg
aagtcgaggttaccggtttcaacgatgaaaatgctggccggccgtgaaagtaattattca
gggcggggaagattctcgttggcagattgttgccatgttttgagccggtatctgcccata
aatggtccttggggggtggaccagtccagaagtcctgcttatgtttctcaattttcgaat
gatggtttggcttttgttgctggatttcagggaggccatattagaatatataatgttgaa
aagggatggaaggttcagaaggatatcctgaccaaaaccttgagatggactattaccgat
acatctctatcaccggaccaacgttatcttgtttatgctagcatgacaccggttgtcaat
attgtgaatgtgggatcttcgacgacggtgtcagttgcaaatgttatggaagttcatgaa
ggtctggatttttctattgaaggcgatgaggatgaatttggaattttctcagttaaattt
tcaactgatgggcgagagcttgttgctgcaagtagtgatgcttcaatatatgtttatgat
ctccaagcaaataaagttagcctccgaataccagctcaccagtctgatgtaaacactgtg
tgctttgctgatgagaccggccatctcatatattctggcagtgacgacaacctctgtaag
gtgtgggacagacgctgcttaatgacgtacggacaagcatctggggtcctgatgggacat
cttgaaggtgttacatttattgatagccggggagatgggcgttacttaatatcaaacggg
aaggaccagacaaccaaactctgggatataagaaagatgtcctctagagccatgtacagc
ccaaggcttacagatcgtgactgggattacagatggatggagtacccagctcatgcaaga
actctgaaacatccaaatgatcagtcattggctacatatagaggccatgcagtcctgcgc
actttaattcgctgttacttttctccagcatatagtactggacaaaagtacatctacact
ggctcaagtgatcattccgtctatatatatgatctggtaaccggagctcaagttgcgaaa
ctagatcatcatgaaggacctgtgagagactgtagttggcatcctctgtatcccattttg
gtcagctcgtcttgggacgggaccgtcgcccgatgggaatttcctggtgatgaccaagtt
cccaccctcgtgaggccgaaaatacgccggaggagaggcttctattga

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