Malus sylvestris (European crab apple): 126596610
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Entry
126596610 CDS
T09027
Name
(RefSeq) protein transport protein Sec24-like At4g32640
KO
K14007
protein transport protein SEC24
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
126596610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126596610
Membrane trafficking [BR:
msyl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
126596610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
126596610
NCBI-ProteinID:
XP_050119210
LinkDB
All DBs
Position
13:21628256..21642267
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AA seq
1063 aa
AA seq
DB search
MQPRPDPLADNMQNLNLNRPPSMPNSAPPRPSPFGQPPPFPSSAPPAAAPPPFSRPGPPP
AAFARPTAPAPRSGAPQPTLSPATTPVKPSGQPVGQPSSFPSRPPPVGGVATASAPSPIG
PVSTPVPAYPRPGPQSMPPTTAPGRMMSNGPPMFGSGAMPGGPRFPPSGNASQPPVGHPP
AMAWAPPMGPPRTPTMHSVLGDPAVSGPPGTTVQQPPPFSAAPPFPAAPQPMRPPPPGSP
YASQTWQVQQGQVAPPSHFPGSAQPPRMFGMPPPPLSNQSMTTISPAGQTGTPLAGSSKI
DPTQIPRPIPSSSVLIHETRQGNQANPPPPATTDYIVRDTGNCSPRYMRCTINQIPCTAD
LLTTSGMPLALLVEPFALPHPNEEPIQVVDFGESGPVRCSRCKGYINPFMKFIDQGRKFI
CNLCGFTDETPRDYHCNLGPDGRRRDADERPELCRGTVEFVASKEYMVRDPMPAVYFFLI
DVSMNAIQTGATAAACSAISQVIADLPEGPRTMVGIATFDSTIHFYNLKRALQQPLMLIV
PDVQDVYTPLETDVVVQLSECHQHLEQLLESIPTMFQNSKIAESAFGAAIKAAFLAIKST
GGKLLVFQSVLASTGIGALSAREAEGRANISSADKEPHKLLQPADKTLRTMAVEFAEYQV
CVDLFITTQSYIDIASVSVIPRTTGGQVYYYYPFSAVSDPAKLYNDLKWNVTRPQGFEAV
MRVRCCQGIQVQEYHGSFCKRIPTDVDLPGIDCDKTIMVTLKHDDKLQDGSECGFQCAVL
YTTVYGQRRIRVATLSLPCTSMLSNLFRAADLDAQFACFMKQAAIEIPSSPLLRVREQVT
NLCISSLLSYRKFCATVSSSGQLILPEALKLLPLYTLALIKSTGLRTDGKIDERSFWINH
VSSLSVPLAVPLVYPRMVAIHDFESKKEGDESLIPPVIPLSSEHVSDEGIYLLENGEDCL
IYIGNLVDSRILQQLFGIASADELPTQFVLQWYDNPLSKKLNDVVNEIRRQRCSYLRLKL
CKKGDPSGALFFSYMVEDQSPNGPTYVEFLVHVHRQIQIKMVS
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgcagccccgccctgatccattagccgataatatgcagaatttgaatcttaatcggccg
ccttccatgcctaattctgcccctcctagaccatcccctttcggccaaccgccgcctttt
ccttcatcagcccctcctgctgctgcaccacctcctttttcacggcctggccctcccccg
gctgcatttgcaagacctacagcaccagcaccgcgatcgggggccccgcaaccaacatta
tcccctgccaccacccccgtaaaaccctccgggcagcccgttggccagccttcatctttt
ccgtctcgaccgcctcctgtgggtggggtagctactgcgtctgcgccatcgccaattggt
ccagtttcgacgccagtgccggcatatcctcggccaggtcctcagagcatgccgccgacg
actgcaccaggtagaatgatgagtaatgggccgccaatgtttggttccggggctatgccg
ggtgggcctcgtttccctccgagtggaaatgcatctcaaccacctgttgggcatccacca
gcaatggcatgggcaccaccaatgggtcctccacgaactccaaccatgcactctgtgctg
ggtgatccagcagttagtggcccaccaggtactactgttcagcagccaccaccattttca
gcagcaccgccatttccagcagcacctcaaccaatgcggccaccacctccaggttctccc
tatgcctcacagacgtggcaagtgcaacaaggacaggtggctccaccttcacattttccg
ggttctgctcaaccacctaggatgtttggaatgccacccccaccgttatcaaatcagtcc
atgactactatctcacctgctggtcaaactggtactcctttggctgggtcatccaagatt
gatcccactcaaattcctcggcctataccaagttcatcggtgctcattcatgaaactcgt
cagggcaatcaggcaaatccacctccgcctgctacaactgattatattgtcagagacact
gggaattgcagtccacgatacatgaggtgcaccatcaatcagataccatgcactgctgat
cttttaacaacatcagggatgcccttagctttgttggttgaaccttttgcccttcctcat
ccaaatgaggaaccaatccaagttgtggattttggtgaaagtggtcccgttcgatgctct
cgttgcaaaggctacataaatccttttatgaagttcattgaccagggcaggaaattcatc
tgtaatctttgtggatttaccgatgagactccccgtgactaccactgcaatcttggtcca
gatggtagacgtagagatgctgatgagaggcctgagctatgtagaggaacagttgaattt
gttgcttcaaaagaatacatggtccgtgatcccatgccagctgtgtacttcttcctcatt
gatgtatccatgaatgccattcaaactggtgcaactgctgcagcttgcagtgcaatcagt
caagttattgctgatcttccagaaggtcctcggacaatggtgggaattgcaacatttgat
tcaacgatccatttttacaatttgaaacgtgcattgcagcagcctttgatgcttattgtt
cctgatgtgcaagatgtttacactcctctggagactgacgtagttgtccagctttctgag
tgccaccaacatttggagcaattgttggaaagtattccaaccatgtttcaaaacagtaaa
atcgctgaatcagcctttggtgcagcaatcaaggctgctttcttggcaattaagagtact
ggagggaaacttttggtgtttcagtcagtgttggcatcaactggaattggagcactctct
gctagagaagctgaaggaagagctaatatatcttcagctgataaggagccccataaatta
ctccaaccagctgacaaaactttaaggacaatggcagttgaatttgctgaatatcaggtt
tgtgtcgacttatttatcactacccagtcatacatagacattgcttctgtctctgtcatc
ccaagaacaactggagggcaggtttactattattatcccttctcagctgtctctgatcct
gcaaagctctacaacgatcttaaatggaatgtcacaaggcctcaaggttttgaggcggtg
atgcgtgtaagatgctgccagggtatccaagttcaagagtaccatggaagcttttgcaaa
cgtattcctacggatgttgacctacctgggattgactgtgacaaaactattatggtgacc
ttaaaacatgatgataaattacaggatggctcagaatgtggtttccagtgtgccgtttta
tacacaactgtgtatggccaacggagaattcgagttgcaactttatctctgccatgcaca
agtatgctaagtaatctgttccgtgctgctgatttggacgctcaatttgcatgtttcatg
aagcaagcggcaatcgaaatcccttcaagtcccctcttgcgtgtacgggaacaagtgaca
aatctgtgcataagtagtctgctttcatatcgtaaattttgtgctactgtatcatcttct
ggacagcttattcttccggaggcactgaagctcctgcctctatacacccttgcattaatc
aaaagtacggggctacggactgatggaaaaatagatgagcggtccttctggatcaatcat
gtttcttccctttctgttcctttggcagttccattggtgtaccccagaatggtggctatt
catgacttcgaatcaaaaaaggagggtgatgagtctctaattcctccggtgattccgctt
tctagcgaacatgtgagtgacgagggaatttatcttctcgagaatggcgaggactgttta
atatatattgggaacttggtagattctagaattttgcaacaactgtttggaatcgcctct
gctgatgaacttcctactcagtttgtgctacagtggtatgataatccattatcgaagaag
ctgaatgatgtggtaaatgaaatacggcgccagagatgttcctaccttcgcttaaagtta
tgcaagaagggagacccatcaggagcattgtttttctcatatatggtcgaagaccagagt
ccgaatggccccacctatgttgagtttctggtacacgtccatcggcaaatacagataaaa
atggtgtcataa
DBGET
integrated database retrieval system
