Malus sylvestris (European crab apple): 126596660
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Entry
126596660 CDS
T09027
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23-like
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msyl03021
]
126596660
Transcription machinery [BR:
msyl03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
126596660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
126596660
NCBI-ProteinID:
XP_050119280
LinkDB
All DBs
Position
13:complement(1291566..1300632)
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AA seq
1602 aa
AA seq
DB search
MDQNQRPSSSASAASRAYQFHPARAAIVNLFDLYLGRSSRQKSDDSVREPPNKSQKRVLA
LNRELPPRNEQFLLDFEQLQSQLPDQDQLRVVTESVLISLVVQCSNHAPQAEFLLFALRS
LCTIGHINWDTFLPSLLSSVSAAEMSVGQGSQAMPTVSSQSGMLPSSNAIPNSFNFQSSS
PASPLPSVHGIGSPSQSAIEPSSMSPVKSSDIASNGQQAMARFNSSIRDNAISSLRQLCC
KIILTGLKFNLKPVTHANIFSHMLNWLVNWDQKQLGVDESDSVRSWRPGKALIEWLHSCL
DVIWLLVDEEKCRVPFYELLRSGLQFMENIPDDEALFTLILEIHRRRDMMAMHMKMLDQH
LHCPTFGTHRIFTQTTPSVSGEAVATLRYSPITYPSVLGEPLHGEDLATSIPKGSLDWER
ALRCIRHALCTTPSPDWWKRVLLVAPCYRSPSQGPTPGAVFISEMICEATIDRIVELLKL
TNSDINCWQQWLVFSDIFFFLIKSGCIDFVDFVDKLVSRLNEGDQQILRTNHVTWLLAQI
IRVEHVMNALNQDARKVETTRKILSFHKEDRSSDPNSPQSILLDFISSCQNLRIWSLNTT
TREYLNNEQLQKGKQIDEWWRTASKGDRMMDYMNMDERSIGMFWVVSYTMAQPACETVIN
WLSSAGVIESLPGTNLQSNERLMVMREVCPLPMSLLSGFSMNLCLKLAYQMEESLFSGQV
VPSIAMAETYCRLLLIAPYSLFRSHFNHLAQRNPSVLSKPGVTFLVLEILNYRLLPLYRY
QGKSKALMYDVTKIVSALKSKRGDHRVFRLAENLCMNLILSLRDFFLVKREGKGPTEFTE
TLNRVTVVTLAIIIKTRGIADADHLLYLQTMLEQILANSNHTWSEKTLRYFPSLLRDVLI
QRIDKRGLAIQEWQQAETTVINQCTQLLSPSADPTYVMTYISHSFPQHRQYLCAGAWILM
QGHPENINSVNLARVLREFSPEEVTSNIYTMVDVLLHHIQLELQHGHSLQDLLLKACANL
SFYIWTHELLPLDILLLALIDRDDDPHALHIVISLLDRQELQQRVKLYCANRGPPEHWLF
SGPFKRVELQKALGNHLSWKDRYPTFFDDIAGRLLPVIPLIIYRLIENDAIDSAEGILVM
YSTFLKYHPLRFTFVRDILAYFYGHLPGKLIVRILNGLEVNKIPFSESFPVHMNLSNSTM
CPPADYFATLLLGLVNNVIPPLHNNSKSGANDALNNSMRAPPNKTPPTSQSGQANVSDGQ
KAFFQIQDPGTYTQLVLETAVIELLSLPVSSSQIVSSLVQIVINIQPTLIQSSNGLHGAP
NGVGQGSVLPTSPSGGSTDSLGTTSRSAASGSGINASNFVSRSGYTCQQLSCLLIQACGL
LLAQLPPDFHVQLYLEASRIIKETWWLTDGKRSMGELDSAVGYALLDPTWAAQDNTSTAI
GNIVALLHSFFSNLPQEWLEGTHLIIKHLRPVTSVAMLRIAFRIMGPLLPKLANAHALFS
KALSLILSMMVDVFGKNVQPPIPVEPLEIADIIDFFHHVVHYEGQGGPVQANSKPRPEVL
ALCGRAAESLRPDIQHLLSHLKPDTNSSIYAATHPKLNQNSS
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaaaccagagaccatcctcctcggcgtcagctgcctcgcgagcttaccagttt
caccccgcacgcgcagcaattgtcaatctcttcgacctctacttaggaagaagtagccgc
caaaaatccgatgattcagttcgagaacctccgaacaagtcacagaagcgtgtacttgct
cttaatcgagagcttccacctcgaaacgagcagttcctactagattttgaacaactgcag
agccagcttcctgaccaagatcaactgcgtgtcgtgacagagtctgtacttatatcttta
gtcgtgcaatgcagcaatcatgcgccgcaggcggagtttcttctctttgctctaaggagc
ttgtgtactataggtcacattaactgggatacttttttgccatcccttctttcttcagtc
tctgctgcagaaatgtcagttggtcaaggtagtcaagcaatgcctactgtttcatcgcag
tccggtatgcttccatcttcaaatgcaatccccaactcgtttaattttcaatcttcaagt
cctgcctctccgttaccttcagtgcatggcattggttcccccagccagtctgctattgaa
ccatcatctatgtcaccagttaaatcatctgacatagcctccaatggacagcaggctatg
gcaaggttcaactcatctataagagataatgccataagcagtcttcgtcagctgtgctgc
aagatcattttaactggactcaaatttaatttaaaaccagtgactcatgctaacatcttt
tcccatatgcttaattggctggttaattgggaccaaaaacaacttggggttgatgaatct
gatagtgtaagatcctggagacctggaaaggcgctaattgaatggctacatagctgtttg
gatgtgatttggcttttggttgacgaggaaaaatgccgagtgcccttctatgaattactg
cgaagtgggttgcaatttatggagaatatacctgatgatgaagccttatttactctaatc
ttggagatccataggaggcgagatatgatggccatgcacatgaaaatgttagatcaacac
ctacattgccctacatttgggactcatcggattttcacgcagacaactcctagtgtttca
ggagaagcagtagcaaccttgcggtattcaccaatcacatatccaagtgttcttggagaa
ccattgcatggagaggaccttgcaacttcaattccaaaaggaagtttggattgggagaga
gctttgcgttgcataaggcatgctctttgtactactccatcacccgactggtggaaacgg
gtgctgcttgtagccccctgctacaggtctccttctcaaggacctactcctggtgctgtt
ttcatctctgaaatgatttgcgaggcaacaattgatagaattgttgagctattgaaattg
accaattcagatattaattgctggcaacagtggcttgtcttttcggatatattctttttt
cttattaaaagtggctgtattgattttgttgattttgtggacaagctagtttcacgcctt
aacgagggtgatcaacaaattcttaggacaaatcatgtcacttggcttcttgctcaaatt
attcgggttgaacatgtgatgaatgctctaaatcaagatgctagaaaggtggagacaaca
agaaagatcctatcgtttcataaagaagataggagctcagatccaaatagtcctcaaagt
atactgctggacttcatcagcagttgccagaatttacgtatttggtcattgaacacgaca
actagagaatatctgaataatgagcagcttcagaaaggaaagcaaatagatgaatggtgg
aggacagcgagcaaaggggaccgaatgatggattatatgaatatggatgaaaggtcaatt
gggatgttttgggttgtgtcttacaccatggcgcagccagcttgtgaaactgtgatcaat
tggttatcctctgctggggttatagagtcgttaccaggaacaaacttacagtccaatgag
aggctaatggttatgcgggaagtatgtccattgccgatgtccttgttatctggcttttca
atgaacctatgtttaaagctggcgtatcaaatggaagaatctttattttctgggcaggtt
gtacctagtattgcaatggctgaaacatattgtaggctgctactcattgcaccttactca
ttatttcgttctcatttcaatcatttggcgcaaaggaatccctcggtattgagcaagcca
ggcgtaacttttttagtgcttgaaatattgaattaccgtttgcttccactttacaggtac
caaggaaaaagcaaagccttgatgtatgatgttacgaaaatagtttctgctctaaaatca
aaacgtggagatcaccgtgtatttaggttggctgagaacttgtgtatgaatcttattctg
tctctgagagactttttcttggtgaaaagagaagggaagggtccaactgaattcacagaa
actttgaatcgagtaacagttgtcactcttgcgatcatcattaagacacgaggaattgct
gatgctgatcatctgctttatcttcaaaccatgttagagcagatattagccaatagtaat
cacacatggtcagagaaaacactacgctatttcccttctcttctacgtgatgttttgatc
caacggattgataaaaggggcctggcaattcaagaatggcagcaggccgaaaccactgtg
attaaccaatgcacccagcttttgtcaccttccgctgatcctacatatgtaatgacctat
atcagtcacagttttcctcaacaccgacaatatctatgtgctggtgcatggatcctgatg
caagggcacccagaaaacattaacagcgtaaacttagcacgtgtcttgagagagttttct
cctgaggaagtaacatctaatatttatacaatggtggatgttctgcttcatcatattcag
ttggaacttcagcatggtcattctttgcaggatcttttattgaaagcttgtgcaaaccta
tctttttatatttggacccacgagttgctccctttggatattttgctcctggcacttatt
gatcgtgacgatgacccccatgctttgcatatcgtgattagtctacttgataggcaagaa
cttcaacagagggtgaaactatattgtgcgaatcgaggtccccctgaacactggcttttc
tctggaccctttaagcgagttgaattgcaaaaggcccttgggaatcatctatcctggaag
gacaggtatcctactttcttcgatgacattgcagggcgtttgctcccagtcattccgttg
ataatttatagactaattgaaaatgatgccatagattcagctgaaggaattctggtcatg
tattctacatttcttaaataccaccctttaagatttacatttgttcgtgacatacttgca
tatttttatggccatcttcccggaaagctcattgtccgaatattgaatggactcgaagtc
aacaagatcccattttctgagtcattcccagtgcatatgaatttatcaaattccaccatg
tgcccacctgccgattactttgcaactctcttactgggactagtgaataatgtcattcct
ccattgcataacaactcaaaatctggagcgaatgatgctttaaataattcaatgcgtgcc
ccacctaacaagactcctccaacgtcgcagtctgggcaagcaaatgtttctgatggccaa
aaagcattctttcaaattcaggatccaggcacatatactcagctggttcttgaaacagca
gtcattgaactgctctctcttcctgtatcttcatcccagattgtatcatcactggttcag
attgtcatcaatatacaaccaacattaattcaatccagcaatggcctgcatggagctcca
aatggtgttgggcaaggctctgttttaccaacatccccttcgggtggaagcacagattcc
ttgggcacgacgagcaggtcagctgcttcagggtcaggaataaatgcatctaactttgtt
tctcgaagtggttatacatgccaacagttgtcttgcttattgatccaagcatgtggtctt
ctactggctcaactgcctcctgattttcatgtgcaactctatctagaggcatcacgtata
ataaaagaaacgtggtggctcactgatggcaaaaggtcaatgggagaattagactctgct
gtcggttatgctttgttggatccaacatgggctgctcaagacaatacctcgaccgccatt
ggtaatattgttgccctgctccattcgtttttcagtaacctcccacaagagtggctagaa
gggacccatcttatcatcaaacatctcaggccggtgacttcagttgcaatgttgagaata
gcattccgaataatgggtcccttgctccctaaactagccaatgcgcacgccctcttcagt
aaggctctgtcattgattttaagtatgatggtagatgtcttcgggaagaatgtacagcct
ccgatcccagtcgagccattagaaatagcagatataattgacttcttccatcacgtcgtc
cactatgaagggcagggaggtcctgtgcaggctaacagcaagcccagaccagaggtttta
gctctctgtggaagagctgcggaaagtctgcgtccggacatacaacaccttctttcccac
ttaaaacccgacacgaattcttccatttacgctgctacgcatcccaagttgaaccagaat
tcgtcgtaa
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integrated database retrieval system
