Malus sylvestris (European crab apple): 126596888
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Entry
126596888 CDS
T09027
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03015
mRNA surveillance pathway
msyl04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126596888
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
126596888
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
msyl01009
]
126596888
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126596888
03036 Chromosome and associated proteins [BR:
msyl03036
]
126596888
Protein phosphatases and associated proteins [BR:
msyl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
126596888
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
126596888
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
126596888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
AAA_33
RHH_4
Motif
Other DBs
NCBI-GeneID:
126596888
NCBI-ProteinID:
XP_050119533
LinkDB
All DBs
Position
13:7554399..7557755
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AA seq
522 aa
AA seq
DB search
MIKNLIGKLPRKPSKSAENRESGGSSATTLNASSIGSRSGDVGNRPINSNSVPLSGLDSD
SNLGYGHGSKLPQLVNSSLNSVTTSYEAFPAFRDVPNSEKHHLFVKKLNLCCVVFDFTDP
TKNLREKDIKRQTLLELVDYVTSANGKFNEIIVQEVVKVVTVNLFRSFSPQPRENKVLEG
FDVEEEEPLMDPAWSHLQIVYELFLRFVASPETDAKVAKKYIDQSFVLKLLDLFDSEDPR
EREYLKTILHRVYGKFMVHRPFIRKAINNIFFRFIFETEKHNGIAELLEVLGSIINGFAL
PLKEEHKLFLVQALIPLHKPRCLQMYHQQLSYCISQFVEKDCKLADTVIRGLLKYWPITN
SSKEVMFLSELEETLEATQPAEFQTCMVPLFRQISRCLSSSQFQVAERALYLWNNDHIED
LIRQNRKVILPIIFPALEKNGHNHWNQVARRLTLNIRKIYSDIDPELFEECLLKFQEDEA
KEEEIKAKHVATWKHLEEIAASNAVSSEAVVGRLDPTQTSPS
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagaatttaattggtaagcttcctaggaagccgtctaagtcagccgagaatcgt
gaatctgggggttcatctgccactacattgaatgcttcctcaataggttcaagaagcggt
gatgtagggaataggccaattaattcaaatagcgtacctctttcgggccttgattctgat
tcaaatttaggatatggccatggaagtaagctccctcaacttgtcaactcaagtctgaat
tctgttaccacttcttatgaagcgtttccagcttttagagatgtaccaaactccgagaag
catcacttgtttgtgaaaaagctgaacttatgttgtgtggtgtttgacttcactgaccca
acgaaaaatctgagagaaaaagacatcaagcggcagacgttgctagagcttgtagattat
gttacttctgcaaatggaaagttcaatgaaatcatagtgcaagaagttgtaaaggtggtg
actgtgaatttgttcaggtcattctctccacagccccgtgagaataaggttttagaagga
tttgatgtggaggaggaggagcctttgatggaccctgcatggtcacacttacagattgtg
tacgaactttttctgaggtttgttgcatcgcccgagacagatgcaaaggtcgctaagaag
tacattgatcagtcttttgttctcaaattattggatctctttgattctgaggatcctagg
gaaagggagtacttaaaaacaattctgcatcgtgtctatggaaagtttatggtgcatcgc
ccattcattaggaaggcgatcaacaatatatttttccgatttatttttgaaacagaaaag
cacaatgggattgctgagcttttagaggttttgggcagtataatcaatggatttgctctt
ccgcttaaagaagaacacaaacttttcctagttcaggctctgatcccccttcacaaacca
agatgcttacaaatgtaccatcagcagttgtcctactgcatttcacagtttgtcgagaaa
gattgcaagcttgcagatactgttataagagggctgttaaagtactggccaatcacaaat
agttcaaaggaagtcatgttcctaagtgagctcgaggaaactttagaagcaactcagcca
gcagaatttcaaacatgtatggtaccactcttccgccaaatatctcgttgcttgagcagt
tcacaatttcaggtggcagagagggccttgtacttgtggaacaatgaccacatcgaggac
ttaatcagacaaaaccgtaaagtcatattgcccattatctttcctgctttggagaagaat
ggccacaaccactggaaccaagtggcgcggaggttgacgttaaacatccgtaaaatctac
tctgacattgatcctgagctatttgaggagtgtttgctcaaatttcaagaagatgaagca
aaagaggaggagattaaagcaaaacatgtagccacctggaagcacttagaagagattgct
gcttctaacgctgttagcagtgaagcagttgttggccgcttggacccaacccagacatct
ccaagctaa
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