Malus sylvestris (European crab apple): 126596992
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Entry
126596992 CDS
T09027
Name
(RefSeq) F-box/LRR-repeat protein 4-like isoform X1
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126596992
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
126596992
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GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_At5g56370
F-box_5
F-box-like
LRR_At1g61320_AtMIF1
LRR_RPS2
F-box
Motif
Other DBs
NCBI-GeneID:
126596992
NCBI-ProteinID:
XP_050119683
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Position
13:complement(14211617..14215890)
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AA seq
614 aa
AA seq
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MRGHDRINTCLPDELIFEVFRRLDSKPSRDACSLVCKRWLALERLSRTTLRIGATGSPDL
VVDLLARLFRNVRTVHIDERLNISLPTHPVITQPIRSIPNSGRRRGTDIAAVSSVRLHSA
NGSGVLDSNSLSDAGMTAIGDGFPKLEKLSLIWCSNVSSIGLISLADKCKMLKSLDLQGC
YVGDQGLAAVGQCCKQLEDLNLRFCEGLTDVCVVELALGVGNSLKSLGITACAKITDTAM
EAVGLHCKSLENLSLDAECIHNKGVVSVAQGCPALKSLKLQCINVTDEALTAVGTSCSSL
EVLALYSFQKFTDKGLRAIGKGCKKLKNLIVSDCYFLSDNALESIATGCKELTHLEVNGC
HNIGTLGLESIGKSCPRLTELALLYCQRIGNFALSEVGRGCQFLQSLHLVDCSSIGDEAI
CNIAKGCRNLKKLHIRRCYEIGNKGVVAVGEYCRSLTGLSLRFCDRVGDQALIAVAQCSS
LQYLNVSGCHQIGDAGLIAIARGCPQLSYLDVSVLQNLGDMAMAELGEGCPNLKDIVLSH
CRQLTDVGINHLVKSCTMLTSCHMVYCPGITSAGVATVVSSCPNIKKVLVEKCKVSPRTK
RRAASVISYLCVDL
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggccacgatcggatcaacacgtgtctccccgacgaactgatcttcgaggtcttc
cggcggctcgactccaagcccagccgcgatgcctgctcccttgtctgcaagcgctggctc
gccctcgagcgcctcagccgcaccaccctccgcatcggcgccaccggcagccccgacctc
gtcgtcgacctcctcgcccgcctattccgcaacgtccgcaccgtacacattgacgagcgc
ctcaacatttcgctccctactcaccccgtaatcactcaaccgattcgatcgatccccaat
tcggggaggaggcgcgggacggatattgcggcggtttcgtcggtgaggctgcattctgcc
aatggctccggcgtgcttgattcgaacagcttatcggacgccggtatgactgctatcgga
gacggattccccaagctcgaaaagttgagcttaatctggtgctccaatgtctccagtatc
ggtctaatttcgcttgctgataagtgtaaaatgttgaaatcattggatttgcagggttgc
tatgttggggatcagggcctagctgccgtgggacagtgttgcaagcagctcgaagatttg
aatttgcggttttgtgagggattgactgacgtatgtgtggttgaattagcccttggtgtt
gggaattcattaaagtctcttggtatcactgcgtgtgcaaagataactgatactgcaatg
gaagcagtggggctgcactgcaagtctctcgaaaacttgtcgttggatgcagagtgcata
cacaacaaaggggtggtttctgtggcccaaggatgtcctgctttgaaatctttgaagcta
caatgtattaatgtcacagatgaggctttgactgctgttggaacttcttgttcgtcgctg
gaggtgttggctctatacagcttccagaaatttactgataaaggtttacgggctattggg
aaaggatgtaagaagttaaaaaatcttattgttagtgactgctactttctgagtgacaat
gctttggaatcaattgcaactggctgcaaggaacttacacatcttgaagtgaatggttgt
cacaatattggaacattgggtctggaatccattggaaaatcttgcccgcgtcttactgag
ttagcattattgtattgccaaaggataggcaactttgcacttagtgaggttggacgaggc
tgtcagttcttgcagtctcttcatctggtagattgctcaagcattggagatgaagccatt
tgtaatatagctaaaggctgtagaaatttgaagaaacttcatattcgtcgatgttatgag
attggaaacaagggagttgtagcagttggagaatattgtaggtctctcacaggccttagc
ctccggttttgtgatagagtgggggaccaggcccttattgctgttgctcaatgtagctcc
ctacaatatctgaatgtcagtggatgccaccaaattggtgatgctggattgatagccatt
gctagagggtgcccgcaacttagttacctagacgtgagtgttctgcagaatttgggggac
atggcaatggctgaactaggagaaggttgtccaaacctgaaggacattgtgctgtcacat
tgccgtcagttaacagatgttggtataaaccatcttgttaaaagttgcacaatgcttaca
tcctgccacatggtttattgcccgggcataacttctgccggagtagccactgtggtttcg
agttgcccaaacataaagaaggtcctggttgagaagtgtaaggtcagcccgaggaccaaa
cggagggcagcctctgtcatttcctatctttgcgtggacctgtag
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