Malus sylvestris (European crab apple): 126597162
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Entry
126597162 CDS
T09027
Name
(RefSeq) SAC3 family protein B-like
KO
K23719
nuclear mRNA export protein SAC3
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126597162
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
126597162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAC3_GANP
MCM3AP_GANP
INT10
Motif
Other DBs
NCBI-GeneID:
126597162
NCBI-ProteinID:
XP_050119884
LinkDB
All DBs
Position
13:14136777..14146908
Genome browser
AA seq
1614 aa
AA seq
DB search
MYPGFGKASGPTGPPGSQPLFGNLGGGRPPSPSPSTTPPFSGAAPLGSPSRGPEAPGQLY
SPPLGFERVRPAASQPYPSAGVYRRPESSGQLHSPPLAFESARPAASHPHPSAGDHRSTE
SHPTWDHGQRSSFKNYDTQAHQRPSAVTSFVVSRNSGTSVTAKVSRFQDTKGIRSPPFLS
KDVNFRNSTQCAPRSHLVAPRIRSPPLVSYEDLHPSVGVEGHAFPSSEMDSRQKLLDHAE
LRSPQEPSLVSPFDGSYATGRNFPLKHDNGQASKRTRPSVSSVGFNTRSYTSFSTPDSRV
HQKSLPSASNTISEAAAGNVTSIPVAKRTRSPPLLPEDQVFHGNSHATQDGTEREMQAKA
KRLARFKVELSKTPQNNPDNVEPGVTANRHEQSNVERNKLAAYKSTELAMDGNDGNALPE
DEGVESSGIIVGLCPDMCPESERTERERKGDLDIYERLDGDRNQTRMSLAVKKYNRTAER
DANLIRPMPILQKTIDYLLNLLDQPYNDRFLRIYNFLWDRMRAIRMDLRMQHIFNQEAIT
MLEQMIRLHIIVMHELCEYSRGEGFVEGFDAHLNIEQMNKTSVELFQLYDDHRKKGINIP
TEKEFRGYYALLKLDKHPGYMVEPAELSLDLAKMTPEIRQTSEVLFARDVARACRTGNFI
AFFRLAREASYLQACLMHAHFSKLRTQALASIHAGLQNNQGLPIADAAKWLAMEEDEIES
LSEYHGFVIKSFQEPYMVKEGPFLNGDEDYPTKCAKLVDMKKSRRIVEDVLASSQVIPLS
SKATKKPQLTKSNKPEPKVISYVEKKSPVRRAPAIEVTKPVHEVDEEMPNFEAFSPPKDA
RQKQQMIQTPIFGQYGEDSPEVAAVSPSLWGFSSFTPQPDKVGTIEKRNYDAPFSNSPET
SMHSGMERMPLQIESKTYVQERSVGIYSSGKEYPDIQIMVTDKLEDKEHPDLHQIDENND
VMESSQQEEIAEAKFKLILRLWKRRAQKLRELREKKQLAANAALNSLSLGPPIQLKTDQP
STSGEFDIDLILRERYKNHGQSWSRLNVSDVIADILGTRNPDARCLCWKTVLCSQMNNLE
GDDLGQRSHVLGAAPWLLSKLMPSANDVDNDDEDLVVSSPGVSVWKKWVRGQSGSDLNCY
LSVVKDASFDNLCQSVSGASAVLFLTSESIPWNLQKVHLHNLLMLIPYGSCLPLLILSGS
YKNNVNDSTIVDNLGLHDLDKSLISSFLVVPLVESQQMGRLDGFFSDNRLREGLRWLASE
SPLQPILHHVKTRELVLTHLNSSLEPLGRMKDYEAGPDNCILAFNEALDWSQKEIAAAVK
SNPSSWPCPEIALLEEFSDEYRVVKWCLPSIGWSSAEKVEPLMSALGDCRLPAFPDHISW
LPQCCNAGKEIENLRGELENGLIEYLTNSSKMMGLALAIKEAPVMLQRSCRLERHDSCCY
IVPNWVMIFRRIFNWRLMGLANGVFLSAYVLESPHLNAVFENLGKLGLEDTGPSPCYLNQ
LSLDEILEVGRAPLSSHRGQPLVESGVAVPETSPNGEIHETPNRTDWMEDERSLAHDGQA
EIENVPHENGRLENAGREMVVTGEVGKGAEKLSRLLEQCNMLQNVIDEKLSIFF
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atgtacccgggatttggcaaggcgtcaggaccaacaggaccgccgggatcgcagccactt
ttcggaaaccttggcggcggtcggccgccttcgccttctccctcgaccacccctcctttt
tccggcgctgctccgctgggttctccgtccagggggcctgaagctccagggcagctgtat
tctcctcccttaggctttgaaagagttcgtcctgctgcgagtcaaccttacccatctgcg
ggagtctataggcggcctgaatcttcagggcagctgcactcacctcctttggcttttgaa
agcgctcgtcctgctgcaagtcatccccacccatctgcaggagatcataggtccacagag
tctcatcctacttgggatcatgggcagagatcctcctttaagaattatgatacccaagct
catcaaaggccatctgctgtcacatcatttgttgtttctcgtaattctggaactagtgtt
actgccaaggtgtccagattccaagacactaaagggatcaggtcgcctccctttctgtct
aaagatgtcaattttagaaattccactcaatgtgcccctagaagtcacttagttgctccg
agaatacgatctcctcccttggtctcttatgaggatttgcatccttctgttggagttgaa
gggcatgcatttccctcttctgaaatggatagtcgtcagaagttacttgatcatgctgaa
ttgcggtctcctcaagaaccttctctagtatcaccttttgatgggtcttatgctactggt
agaaattttcctctgaaacatgacaatggtcaggcctcgaaaagaacaaggccttctgta
tcttctgttgggttcaatactagatcatataccagttttagtactcctgattctcgggta
catcaaaagtctttgccatctgcaagcaatactatttctgaagctgctgcaggaaatgtg
accagcatccctgtggccaaaaggacaagatcaccacctttacttcccgaggatcaagtg
tttcatggaaactctcatgccactcaagatggtactgaacgagaaatgcaagccaaagct
aagcggttagcccggttcaaggttgaattaagtaaaactccacaaaacaatcctgataat
gtagagccaggggttactgcaaatagacatgagcaatctaatgttgagaggaacaaatta
gctgcatataaatctaccgaactggctatggatggtaatgatggcaatgctttacctgag
gatgaaggcgtggagtcgtctggtatcattgttgggttgtgcccggatatgtgtccagag
tcagaaaggacagaacgagaaaggaaaggggatcttgatatatatgagcgcttggatggg
gatagaaatcaaaccagaatgtcccttgctgttaaaaagtataacagaacagctgagcga
gatgcaaacctgataagaccaatgccaatcctgcagaagacaattgattatttgctcaat
ttgcttgatcagccttacaatgataggtttcttagaatttacaacttcctgtgggatcgg
atgcgagcaattcgaatggacttgagaatgcagcacatttttaaccaagaggctattact
atgctggagcaaatgataagacttcacataattgtcatgcatgaattatgtgaatactca
agaggagaaggctttgttgagggatttgatgcacacctcaatattgaacagatgaataaa
acatctgttgaattgttccaattgtatgatgatcacagaaagaaaggaataaacattcct
acagaaaaagagtttcgaggttattatgcccttctcaagctggacaagcatcctgggtac
atggttgaacctgcagagctctcgcttgatcttgcaaagatgactccagaaataagacaa
acttcagaggtgctatttgcacgtgatgtcgctagagcttgcagaactggtaattttatt
gctttttttcgacttgcaagggaagcaagttacctccaagcatgcctaatgcatgctcac
ttctcaaagttacgaacccaggcacttgcttctatacacgcaggtctccagaataaccaa
ggtctccctattgcggatgctgccaagtggctggcaatggaggaagatgaaattgaaagc
ctttcagagtatcatgggtttgtaataaagtcattccaggagccatatatggtgaaggaa
ggtccatttctcaatggtgatgaggattatcctaccaagtgtgctaaacttgttgatatg
aaaaagtcaagaaggatagtagaggatgttttggcttctagtcaagtcatacccttgtct
tctaaagcaacaaaaaagcctcagttgactaagtcaaataagcctgaacccaaagttatt
tcatatgttgaaaagaaaagtcctgttcgtcgtgccccagccattgaagttacaaaacct
gtccatgaagttgatgaagaaatgcctaattttgaagctttttcacccccaaaagatgcc
agacaaaagcagcaaatgattcaaacaccaatttttggtcaatacggtgaagattcccct
gaggtggctgctgtgtctccttccctgtggggtttctcatcatttacacctcagccggat
aaagttggtaccattgagaagcgaaactatgatgctccttttagtaactctccagagaca
agcatgcattctggcatggaacgaatgccactgcaaattgagtcaaaaacatatgtacaa
gagagatctgttggtatatatagttccgggaaggaatacccagatatccaaattatggta
actgataagttggaagacaaggaacatccagatcttcatcagatagatgaaaataatgat
gttatggagagttctcaacaggaagaaattgcggaggcaaaatttaagttgatactgaga
ttatggaagcggcgtgctcagaagctaagagaattgcgagagaaaaagcagttggcagca
aatgctgcattgaattctttatcattggggccaccaattcaactcaagacagatcaacca
agcacttctggcgagtttgacattgatctcatcttgagggagagatataaaaaccatggt
cagtcatggtcaagacttaatgtttcagatgtaatagcggatatactgggcacaagaaat
ccagatgctagatgcctctgttggaaaactgttttatgttctcagatgaacaatctagaa
ggtgatgacctagggcagaggagccatgtcttgggagcagccccctggttgctttcaaag
ctcatgccttcagcaaatgatgtggacaatgatgatgaggatcttgtagtttcatctcct
ggtgtctctgtatggaagaaatgggttcgtggccaatctggttcagatctgaattgctat
ttgtctgtggtcaaggatgcaagttttgataacctatgtcagagtgtatctggtgcaagt
gctgttttgttccttacatctgagagcatcccttggaatttgcaaaaagtccatcttcat
aaccttctgatgttgataccgtatggttcctgcttgccccttctgatcttaagtggctct
tacaagaacaatgttaatgactccactattgttgataatttgggtctccatgacttggat
aagtcactaataagcagctttctggttgttccacttgttgaaagccagcaaatgggacga
ttggatggttttttcagtgacaaccgacttagggaggggctccggtggcttgcaagtgaa
tcgccccttcaacccattcttcatcatgtgaaaacacgcgaactcgttcttacccacttg
aattcttcactggagccactaggcagaatgaaagattatgaagcaggtccagacaactgt
atccttgccttcaatgaagcattggattggtcacagaaggaaattgctgctgctgtcaaa
tcaaatccatccagttggccttgccctgagattgctttgctggaggagttcagtgatgag
tatagggttgtgaaatggtgcttgccaagcataggatggagctcagcggaaaaagttgaa
ccgctaatgtcagcactaggggattgtaggcttccagcttttcccgaccatatttcatgg
ctaccccaatgttgtaatgcaggaaaggagattgagaacctgagaggtgaacttgaaaat
ggcttgatcgagtacctgacgaattcaagtaagatgatgggacttgcacttgctataaaa
gaggcacctgtaatgctacaaagaagctgtcggctggagcgccatgactcgtgctgctat
atagtcccgaattgggttatgatcttcagacgaattttcaactggcggttaatgggttta
gccaatggggtctttttgtcagcttatgtattggagagtcctcatcttaacgcagttttt
gaaaatctgggtaagttggggcttgaagataccggaccttcgccctgttaccttaatcag
ctgtctctggatgaaatcctcgaagttgggcgcgcccctctttcatcccatagaggtcag
cccttggtagaatctggtgtagctgttcctgaaacatctcctaatggtgaaatccacgag
accccgaatagaacggactggatggaggatgaacgaagtttggcgcacgatggtcaagcg
gaaatagaaaacgtaccccacgaaaatgggagattggagaatgctggcagagaaatggtg
gtgactggagaagtgggcaagggggctgaaaaattaagcagattgttagaacagtgtaac
atgttacagaatgtgatagacgagaagctgtccatttttttctaa
DBGET
integrated database retrieval system
