Malus sylvestris (European crab apple): 126597408
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Entry
126597408 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126597408
KO
K11097
small nuclear ribonucleoprotein E
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126597408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126597408
03041 Spliceosome [BR:
msyl03041
]
126597408
03032 DNA replication proteins [BR:
msyl03032
]
126597408
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
126597408
Spliceosome [BR:
msyl03041
]
Complex A
U1 snRNP components
Sm proteins
126597408
U2 snRNP components
126597408
Complex B
U1 snRNP components
126597408
U4/U6.U5 tri-snRNP components
126597408
Complex C
U2 snRNP components
126597408
DNA replication proteins [BR:
msyl03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
126597408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
126597408
NCBI-ProteinID:
XP_050120162
LinkDB
All DBs
Position
13:32010950..32014393
Genome browser
AA seq
88 aa
AA seq
DB search
MASAKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDEAEEV
SIKKKTRKSLGRILLKGDNITLMMSTGK
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgctaaagtccagaggattatgacccaacccattaacttgattttcaggttc
cttcaaagtaaagctcgcattcagatttggctatttgagcagaaggacctcaggattgaa
ggccgaattattggttttgatgagtacatgaatttggttctggatgaagccgaagaagtc
agcatcaagaaaaagaccagaaagtcgttaggaaggattcttctcaaaggagataacatt
actctgatgatgagcacggggaaatga
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