Malus sylvestris (European crab apple): 126597581
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Entry
126597581 CDS
T09027
Name
(RefSeq) protein RDM16-like
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126597581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msyl03041
]
126597581
Spliceosome [BR:
msyl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
126597581
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
126597581
NCBI-ProteinID:
XP_050120368
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Position
1:complement(20877136..20881524)
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AA seq
868 aa
AA seq
DB search
MEKGKSSKRDRRDRDRDYDKHRSRDADEKRSSKDTDYHRHHHRSDRDSKREPRDHKSRRE
RSREPSEDGRDVSRDHRERSYEPRAEREGSRERSRHREAKRERSEEREESKRKRKERERS
EGRDGDRDGLEDKKRSRVSEGERRERKRFEEDGQEVNGDQRKSRRFDDPRVKEEDGENGG
AVGRRTELNVNASEVNVKKVEVGEDQIGNFQSVAAPPNGSGWVGNGAALEPAMTSRTMPE
TSFAPNHPLPTKVSSIPTTNENKGVSITRSHEVHGNSSTDGTSSTAGKSANLSLGDVEKI
KRTLQKQKELTEKLKKLNQLKKGGNASKDASHNLETKEALKPPSTTGGILHAPAPSTAGG
TAASVATFDSSALPISAAAIPNFEAVKRAQELAAQMGFRHDPEFSPLINVFPGQVATDVA
APQKPTKAPVLRLDALGREIDEHGNLVNVTKPNNLSTLKVNINKQKKEAFQILKPELDVD
PEKNPHFDPDVGISKKFLRPKRMGFAFVEEGKWTKDAELIKLKSKFGEAQAKEQRAKQQQ
FAKARAAPDINPNLIEVGERVITKEKPKDPIPEIEWWDVPLLHSGTYNEVIDGTVAEEKL
KMEKITIYIEHPQPIEPPTEPAPPPPQPLKLTKKEQKKLRTQKRLAREKDRQEMIRQGLL
EPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAEREQAHADRNIARKLTPAERREKK
ERKLFDDPNNVETIVSVYRINELSHPKARFKIDVNARENRLTGSCVISDGINVAVVEGGS
KSIKRYAKVMLRRINWAEAVKEEEEDDDVEDDKPPNKCVLVWQGSVARPSFNRFYVHECM
TEAAARKIFADAGVAHYWDLAVNFQDDN
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaggcaaatcgagcaaacgcgaccgcagggatcgagacagagactacgataag
catcgcagccgtgacgccgatgaaaagcgatcgtcaaaggacaccgattaccaccgccac
caccatcgatcggaccgcgattccaagcgcgagccccgcgaccacaaatctcgtcgggaa
cggtcacgcgagcccagtgaagacggcagggatgtctcgcgggaccaccgcgagcggtcc
tacgagcccagggccgagagggaagggagcagagagaggtccaggcatcgggaagcgaaa
cgcgagaggtcggaggagcgagaggaatcgaagcgtaagaggaaagagagggagaggagt
gagggtagagatggcgatcgtgatggtttagaagataagaagaggtccagggtttcggag
ggggagaggagagagaggaagcgattcgaggaagatggtcaggaagtgaatggagatcag
agaaagagtaggaggtttgatgacccccgagtcaaggaagaggatggagagaatggtgga
gctgttggacggagaactgaattgaatgtgaatgcgagtgaggttaatgttaagaaagta
gaagttggggaggatcagattggcaatttccagagcgtcgccgcccccccaaatgggagt
ggttgggtgggtaatggtgctgctctggaacctgctatgacatcaaggactatgcctgag
acctcttttgctcccaatcatccccttcctaccaaggtatcttcaattcctacaacaaat
gaaaataagggagttagtattaccagatctcatgaggttcatggaaactctagtacagat
ggaacatcttcaactgctgggaaaagtgcgaatctgtctcttggtgatgtagaaaaaatt
aagagaactttacaaaagcagaaggaattgactgagaagctgaagaagcttaaccagttg
aagaagggcggcaatgcaagcaaagatgctagccataacttggaaacgaaggaggcactg
aaaccaccatctaccactggtgggatactacatgcaccggctccatcaacagctggtggt
acagctgcttctgtggcaacatttgattcatctgcactacccatttctgcagcagccatt
cccaattttgaagctgtaaaacgtgcacaagagcttgctgctcagatggggttccgtcat
gaccccgagttttctcctcttataaacgtgtttcccggacaagtggcaactgatgttgct
gcccctcagaagcctactaaggcccctgttcttcgtcttgatgcccttggaagggaaata
gatgagcacggaaatttagtgaatgtgaccaaaccaaacaacctcagcactcttaaggtc
aacattaacaaacagaagaaagaagcattccagattctaaaacctgaattggatgtggat
cctgaaaagaatcctcattttgatccggatgtgggcatcagtaaaaaatttttgaggcca
aagaggatgggttttgcatttgtagaggaaggaaaatggacaaaagatgctgagcttata
aaattaaagagtaaatttggagaagcacaagccaaagagcaaagagcaaagcagcaacag
tttgcaaaggcaagggcagcgccagatattaatccaaatttgatagaggtaggagagaga
gttatcaccaaagaaaagccaaaggatccaattcctgaaatcgagtggtgggatgtgccc
ctcttgcactctggtacttataatgaagtcatcgatggtacagtagctgaagaaaaatta
aagatggaaaaaatcacaatctatattgagcatcctcaacctattgagccccctactgag
ccagctcctccaccgcctcaacctctgaagttgaccaagaaggaacagaaaaaactacgt
acacagaaacgtctggccagagagaaagataggcaggagatgattagacaaggcctactt
gagcctccaaagccaaaagttaaaatgagtaatttgatgaaagttcttggctctgaagca
acccaagatccaaccaggcttgaaaaggagatccggagtgcagctgctgaacgtgaacaa
gctcatgcagacaggaatatagcacgcaagctcactcctgccgaacgacgcgagaagaaa
gaaaggaagctttttgatgacccaaataacgtggagaccatagtctcagtttacaggatc
aatgagctgtcgcatccaaaggcccgcttcaagatagatgttaatgcgcgagagaaccgg
ctgactggatcttgtgtgatatcagatggtattaatgttgcggttgttgaaggtggaagc
aagtctattaagaggtatgctaaggttatgcttaggcgcataaactgggctgaagcagta
aaagaagaggaagaagatgatgatgttgaagatgacaagcctcctaacaagtgcgtgtta
gtatggcaaggaagtgttgccagaccgagcttcaatagattttatgttcatgaatgcatg
accgaagctgctgcccggaagatttttgctgatgctggcgttgctcattactgggatctt
gcggtcaacttccaagatgataattag
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