KEGG   Malus sylvestris (European crab apple): 126597581
Entry
126597581         CDS       T09027                                 
Name
(RefSeq) protein RDM16-like
  KO
K12843  U4/U6 small nuclear ribonucleoprotein PRP3
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    126597581
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:msyl03041]
    126597581
Spliceosome [BR:msyl03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    126597581
SSDB
Motif
Pfam: PRP3 Prp3_C
Other DBs
NCBI-GeneID: 126597581
NCBI-ProteinID: XP_050120368
LinkDB
Position
1:complement(20877136..20881524)
AA seq 868 aa
MEKGKSSKRDRRDRDRDYDKHRSRDADEKRSSKDTDYHRHHHRSDRDSKREPRDHKSRRE
RSREPSEDGRDVSRDHRERSYEPRAEREGSRERSRHREAKRERSEEREESKRKRKERERS
EGRDGDRDGLEDKKRSRVSEGERRERKRFEEDGQEVNGDQRKSRRFDDPRVKEEDGENGG
AVGRRTELNVNASEVNVKKVEVGEDQIGNFQSVAAPPNGSGWVGNGAALEPAMTSRTMPE
TSFAPNHPLPTKVSSIPTTNENKGVSITRSHEVHGNSSTDGTSSTAGKSANLSLGDVEKI
KRTLQKQKELTEKLKKLNQLKKGGNASKDASHNLETKEALKPPSTTGGILHAPAPSTAGG
TAASVATFDSSALPISAAAIPNFEAVKRAQELAAQMGFRHDPEFSPLINVFPGQVATDVA
APQKPTKAPVLRLDALGREIDEHGNLVNVTKPNNLSTLKVNINKQKKEAFQILKPELDVD
PEKNPHFDPDVGISKKFLRPKRMGFAFVEEGKWTKDAELIKLKSKFGEAQAKEQRAKQQQ
FAKARAAPDINPNLIEVGERVITKEKPKDPIPEIEWWDVPLLHSGTYNEVIDGTVAEEKL
KMEKITIYIEHPQPIEPPTEPAPPPPQPLKLTKKEQKKLRTQKRLAREKDRQEMIRQGLL
EPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAEREQAHADRNIARKLTPAERREKK
ERKLFDDPNNVETIVSVYRINELSHPKARFKIDVNARENRLTGSCVISDGINVAVVEGGS
KSIKRYAKVMLRRINWAEAVKEEEEDDDVEDDKPPNKCVLVWQGSVARPSFNRFYVHECM
TEAAARKIFADAGVAHYWDLAVNFQDDN
NT seq 2607 nt   +upstreamnt  +downstreamnt
atggagaaaggcaaatcgagcaaacgcgaccgcagggatcgagacagagactacgataag
catcgcagccgtgacgccgatgaaaagcgatcgtcaaaggacaccgattaccaccgccac
caccatcgatcggaccgcgattccaagcgcgagccccgcgaccacaaatctcgtcgggaa
cggtcacgcgagcccagtgaagacggcagggatgtctcgcgggaccaccgcgagcggtcc
tacgagcccagggccgagagggaagggagcagagagaggtccaggcatcgggaagcgaaa
cgcgagaggtcggaggagcgagaggaatcgaagcgtaagaggaaagagagggagaggagt
gagggtagagatggcgatcgtgatggtttagaagataagaagaggtccagggtttcggag
ggggagaggagagagaggaagcgattcgaggaagatggtcaggaagtgaatggagatcag
agaaagagtaggaggtttgatgacccccgagtcaaggaagaggatggagagaatggtgga
gctgttggacggagaactgaattgaatgtgaatgcgagtgaggttaatgttaagaaagta
gaagttggggaggatcagattggcaatttccagagcgtcgccgcccccccaaatgggagt
ggttgggtgggtaatggtgctgctctggaacctgctatgacatcaaggactatgcctgag
acctcttttgctcccaatcatccccttcctaccaaggtatcttcaattcctacaacaaat
gaaaataagggagttagtattaccagatctcatgaggttcatggaaactctagtacagat
ggaacatcttcaactgctgggaaaagtgcgaatctgtctcttggtgatgtagaaaaaatt
aagagaactttacaaaagcagaaggaattgactgagaagctgaagaagcttaaccagttg
aagaagggcggcaatgcaagcaaagatgctagccataacttggaaacgaaggaggcactg
aaaccaccatctaccactggtgggatactacatgcaccggctccatcaacagctggtggt
acagctgcttctgtggcaacatttgattcatctgcactacccatttctgcagcagccatt
cccaattttgaagctgtaaaacgtgcacaagagcttgctgctcagatggggttccgtcat
gaccccgagttttctcctcttataaacgtgtttcccggacaagtggcaactgatgttgct
gcccctcagaagcctactaaggcccctgttcttcgtcttgatgcccttggaagggaaata
gatgagcacggaaatttagtgaatgtgaccaaaccaaacaacctcagcactcttaaggtc
aacattaacaaacagaagaaagaagcattccagattctaaaacctgaattggatgtggat
cctgaaaagaatcctcattttgatccggatgtgggcatcagtaaaaaatttttgaggcca
aagaggatgggttttgcatttgtagaggaaggaaaatggacaaaagatgctgagcttata
aaattaaagagtaaatttggagaagcacaagccaaagagcaaagagcaaagcagcaacag
tttgcaaaggcaagggcagcgccagatattaatccaaatttgatagaggtaggagagaga
gttatcaccaaagaaaagccaaaggatccaattcctgaaatcgagtggtgggatgtgccc
ctcttgcactctggtacttataatgaagtcatcgatggtacagtagctgaagaaaaatta
aagatggaaaaaatcacaatctatattgagcatcctcaacctattgagccccctactgag
ccagctcctccaccgcctcaacctctgaagttgaccaagaaggaacagaaaaaactacgt
acacagaaacgtctggccagagagaaagataggcaggagatgattagacaaggcctactt
gagcctccaaagccaaaagttaaaatgagtaatttgatgaaagttcttggctctgaagca
acccaagatccaaccaggcttgaaaaggagatccggagtgcagctgctgaacgtgaacaa
gctcatgcagacaggaatatagcacgcaagctcactcctgccgaacgacgcgagaagaaa
gaaaggaagctttttgatgacccaaataacgtggagaccatagtctcagtttacaggatc
aatgagctgtcgcatccaaaggcccgcttcaagatagatgttaatgcgcgagagaaccgg
ctgactggatcttgtgtgatatcagatggtattaatgttgcggttgttgaaggtggaagc
aagtctattaagaggtatgctaaggttatgcttaggcgcataaactgggctgaagcagta
aaagaagaggaagaagatgatgatgttgaagatgacaagcctcctaacaagtgcgtgtta
gtatggcaaggaagtgttgccagaccgagcttcaatagattttatgttcatgaatgcatg
accgaagctgctgcccggaagatttttgctgatgctggcgttgctcattactgggatctt
gcggtcaacttccaagatgataattag

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