Malus sylvestris (European crab apple): 126598392
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Entry
126598392 CDS
T09027
Name
(RefSeq) transcription initiation factor IIB-like
KO
K03124
transcription initiation factor TFIIB
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126598392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msyl03021
]
126598392
Transcription machinery [BR:
msyl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
126598392
Prokaryotic type
Archaeal type
TFB
126598392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
Hexokinase_2
WHD_GDS1
DFP
Motif
Other DBs
NCBI-GeneID:
126598392
NCBI-ProteinID:
XP_050120711
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All DBs
Position
14:26029547..26033946
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AA seq
311 aa
AA seq
DB search
MSDTFCRDCNSLTEVVFDHRAGDAICSECGLVLEAHTVDETAEWRSFADDSNDKDPNRVG
GPVNPLLSEAGLSTVIARPRNGGSSSEALPSSVGKWQGRASKPDRHLLDVFGAIAVMADR
LGLVTIIKDRANEIYKKVEDQKPLRGRNQDAVVAACLYIACRQENKARTMKEICTAVSGA
TKKEIGRAKEFILKHLEAELGQEMGTIHAGDYLRRFCSNLGMKNRDVKAAQEMVQNIEEL
VIRRSPISVAAAVTYTINQLSDEKMSLKEISVATQVAEGTIKNSYKDLHPHLARIIPNWF
ANEECVKNLQP
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacacgttttgccgcgactgtaatagtctgacggaggttgtcttcgaccacaga
gcgggcgacgcgatatgctccgagtgcggcctcgtactggaggcgcataccgtcgacgag
accgctgagtggcgctccttcgcagacgattccaacgacaaagacccgaaccgtgtcggc
ggacccgttaacccgcttttgtcagaagctgggctttccaccgtcatcgccaggcccaga
aatggcggctcctcctccgaagccttgccctcctccgtcgggaagtggcaaggccgcgcc
tctaagccggaccgtcatcttctcgacgtcttcggtgcaattgccgtgatggccgacagg
ttgggacttgttacaatcataaaggatcgagccaatgaaatctacaagaaggtagaagat
caaaaacctctccgagggcgaaatcaagatgcagttgtggctgcttgcctttacattgct
tgtagacaagaaaataaggctcgtactatgaaagaaatatgcactgcagtcagtggagct
accaagaaggaaattggacgggcaaaagagttcattttgaaacacctggaggccgagctt
ggtcaggaaatgggaactatccatgctggagattatctgagacgcttttgttccaatctt
ggaatgaagaatcgagatgtcaaggctgcccaagaaatggtgcagaacattgaagagctt
gttataaggaggagccccatatcggtggcagctgccgttacttataccattaatcaacta
tcagatgagaaaatgtctcttaaagagatctcggttgccactcaagttgccgaagggacg
atcaagaactcctacaaagacctgcatcctcatctagcaaggataataccgaactggttc
gccaacgaggaatgtgtcaagaatctgcagccctag
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integrated database retrieval system
