Malus sylvestris (European crab apple): 126598497
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Entry
126598497 CDS
T09027
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
126598497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126598497
Enzymes [BR:
msyl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126598497
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
126598497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
Beta-prop_NOL10_N
zf-RING_UBOX
FAIM1
Motif
Other DBs
NCBI-GeneID:
126598497
NCBI-ProteinID:
XP_050120820
LinkDB
All DBs
Position
14:complement(5474305..5478616)
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AA seq
287 aa
AA seq
DB search
MAIAKSEAGSNSMLSKTTPGLGGKHGLYSTNGVHELLECPVCTNLMYPPIHQCPNGHTLC
SDCKIRVHNCCPTCRYELGDIRCLALEKVAESLELPCRYQSLGCHDIFPYYSKLKHEQHC
RFRLYNCPYAGSECSVTGDIPTLVGHLKEDHKVDMHDGCTFNHRYVKANPNEVENATWML
TVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDDIEAKKFSYSLEVGANGRKLIWQGIP
RSIRDSHGKVRDSQDGLIIQRNLALYFSGGDRQELKLRITGRIWKEE
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcgctaagtcggaggcaggtagcaatagtatgctaagtaagactacccctggt
ttgggtggaaagcatggtctgtattcaacaaatggtgtgcatgagttacttgagtgccct
gtctgcacgaatttgatgtaccctcctattcatcagtgtcctaatggccacacgctatgt
tcagactgcaagataagggtgcacaattgttgccccacttgtcgctatgagcttggagat
ataaggtgtttggctttggagaaagttgctgaatcgttggaacttccatgccgataccag
agtttaggctgtcatgatatttttccgtactacagcaagctcaaacatgagcaacactgt
cgatttcgtctatacaactgcccttatgctggatctgagtgctctgttacaggtgatatc
cccactctcgttgggcatcttaaggaggatcacaaggttgacatgcatgatgggtgcacc
ttcaaccatagatatgttaaagcaaacccaaatgaagttgaaaatgcaacttggatgctt
actgtcttcaattgtttcggaagacagttctgtttgcactttgaggccttccaattagga
atggctccggtctacatggcttttttacgattcatgggtgatgatattgaagctaagaag
ttcagctatagtttggaagttggtgcaaatggccgtaagctaatatggcaggggatccct
aggagtattcgtgacagtcatggaaaagttcgggacagccaggatggactcattattcag
aggaacctggctctctatttctcaggcggggataggcaagaactaaagttgaggattact
ggccgtatatggaaagaagaatga
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