KEGG   Malus sylvestris (European crab apple): 126598543
Entry
126598543         CDS       T09027                                 
Name
(RefSeq) sm-like protein LSM8
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl03018  RNA degradation
msyl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    126598543
  09123 Folding, sorting and degradation
   03018 RNA degradation
    126598543
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msyl03019]
    126598543
   03041 Spliceosome [BR:msyl03041]
    126598543
Messenger RNA biogenesis [BR:msyl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     126598543
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     126598543
Spliceosome [BR:msyl03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    126598543
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 126598543
NCBI-ProteinID: XP_050120869
LinkDB
Position
14:complement(30347374..30349508)
AA seq 98 aa
MSSGTGLESLVDQTISVITNDGRNIVGVLKGFDQSTNIILDESHERVFSTKEGVQQLVLG
LYIIRGDNISIVGELDADLDSTVEWSKMRAYPLKPVIH
NT seq 297 nt   +upstreamnt  +downstreamnt
atgtcgagtggcactggtcttgagtcactcgttgatcaaacaatttcagttatcacaaat
gatggacggaatattgtgggagtcttgaaaggctttgaccagtctactaatatcattctc
gatgaatctcatgaacgtgttttctctacaaaggagggtgttcagcaactcgtgttgggg
ttatatataatcagaggtgacaacataagcattgttggggaattagatgcagatcttgat
tctactgttgagtggtcaaagatgagagcttatcccctcaagcctgtcatccactga

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