Malus sylvestris (European crab apple): 126598751
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Entry
126598751 CDS
T09027
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
126598751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126598751
03009 Ribosome biogenesis [BR:
msyl03009
]
126598751
04131 Membrane trafficking [BR:
msyl04131
]
126598751
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msyl04147
]
126598751
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
126598751
Ribosome biogenesis [BR:
msyl03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
126598751
Membrane trafficking [BR:
msyl04131
]
SNARE
SNARE associated proteins
Others
126598751
Autophagy
Aggrephagy
Other aggrephagy associated proteins
126598751
Exosome [BR:
msyl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
126598751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_2
AAA_16
CDC48_2
AAA_5
TIP49
AAA_14
AAA_33
AAA_22
NPHP3_N
RNA_helicase
AAA_17
AAA_28
Parvo_NS1
nSTAND3
Mg_chelatase
AAA_18
AAA_7
IstB_IS21
ABC_tran
AAA_24
Viral_helicase1
ATPase_2
Vps4_C
NACHT
AAA_lid_PRS2_C
Sigma54_activat
DUF815
TsaE
ResIII
NB-ARC
Zeta_toxin
Sigma54_activ_2
SLFN-g3_helicase
Zot
Motif
Other DBs
NCBI-GeneID:
126598751
NCBI-ProteinID:
XP_050121065
LinkDB
All DBs
Position
14:complement(24855692..24859898)
Genome browser
AA seq
819 aa
AA seq
DB search
MAPLSPSAPDRSQPSSSSDPKSNKKDFSTAILERKKSPNRLVVDEAVNDDNSVISLHPAA
MEKLQFFRGDTVLIKGKKRRDTICIIIADDECEEPKIRMNKVVRANLRVRLGDVVSVHPC
PYVKYGKKVHILPIDDTIEGVTGSLFDAYLKPYFVDSYRPMRKGDLFLVRGMMRSVEFKV
METDPAEYCIVAPDTEIFCEGEPVKREDEERLEDVGYDDVGGVRKQMAQIRELVELPLRH
PQLFKSIGVKPPKGILLYGPPGTGKTLIARAVANETGAFFVLINGSEIMSKMAGESESNL
RKVFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGA
TNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKRMKLADDVDLERVAKDTHGF
VGADLAALCTEAALQCIREKMDVIDLEDETIDAEVLNSMAVTNEHFQTSLSSTNPSALRE
TVVEVPNVSWDAIGGLDNVKRELQETVSIPVEHPEMFEKFGMSPSKGVLFYGPPGCGKTL
LAKAIASECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQR
GNSVGDAGGAGDRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIP
LPDEASRLQIFKACLRKSPISKDIDLAALARYPHGFSGADITEICQRACKYAIREDIEKD
IERERRKNANPEAMEEDEIDEVAEIKPAHFEESMKYARRSVSDADIKKYQLFAQTLQQSR
GFGSEFRFPAQQTENNAGEAALSPFSSAAVAGEEADLYD
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctctgagtccatctgctcctgatcgttctcagccctcttcgtcttcggacccg
aaaagcaacaagaaagatttttcgactgctattttggaacgaaagaagtctcctaatcga
cttgttgtcgatgaagctgtcaatgatgataattctgtgatttccttgcaccctgctgca
atggagaagcttcagtttttccgtggagacactgttttaattaagggcaagaaaaggaga
gacacaatttgcattattattgccgatgatgaatgcgaggaaccgaaaatcagaatgaac
aaagttgtgagagctaatcttagggttcgccttggagatgttgtgtctgttcatccctgc
ccttatgtcaagtatggaaagaaggttcacatccttccaatcgatgatacaattgaagga
gtgacaggaagcttattcgatgcatatttgaagccatacttcgttgattcttaccggcct
atgaggaagggtgatcttttcctggttcggggcatgatgcgaagcgttgagttcaaggtc
atggagacagaccctgctgagtattgcattgttgcaccggatactgagattttctgtgag
ggagagcctgtcaaacgtgaggacgaggaaagactagaggatgtgggatatgatgatgtt
ggaggtgttagaaagcaaatggcccagatacgggagttagtagaactgcctcttagacat
ccgcagctcttcaaatcgattggagttaaacccccgaagggcattttactctatgggcca
cccgggactggaaaaactttgattgcaagggctgtagcgaatgagactggagcgttcttt
gttttgatcaatggatctgaaataatgtccaagatggcaggtgaaagtgaaagcaacttg
aggaaggtgtttgaggaagccgaaaagaatgcaccctcaatcatttttattgatgagata
gattctattgctccaaagagagaaaagacccacggtgaagtggaaaggcgtatagtttcc
cagctcctgactttaatggacggccttaagtcccgtgcccatgtcattgtcatgggagca
acgaataggccaaacagcatcgaccctgctctgaggagatttggaagattcgatagagag
attgacattggtgtgccggatgaagttggaagattggaagttttacgaatccatacaaag
aggatgaaacttgcagatgatgttgatctcgaaagagttgcaaaagatacccatggtttt
gttggtgcagatcttgctgctctctgcacagaggccgcacttcagtgcatccgcgaaaaa
atggatgttattgatttggaagatgaaacgattgatgctgaggtgttgaattcgatggct
gtgacgaatgaacactttcagacctcattgtcctctacaaatccttctgccttgcgcgaa
actgttgtggaggtaccaaatgtttcgtgggatgccattggtgggttggacaacgtcaaa
agagaacttcaagagactgtttcaatccccgtggagcatccagagatgtttgagaaattt
ggcatgtcgccttctaaaggcgttctcttttatggaccgcctggctgtgggaaaaccctt
ctcgccaaggcaattgccagcgaatgtcaggccaacttcatcagtatcaaaggacccgag
ttgctaacaatgtggtttggagaaagtgaggccaatgtgcgcgagatatttgacaaggct
cgccaatctgctccttgtgttctcttctttgatgagctagactcgattgcaactcagcgt
ggaaattctgtgggagatgccggtggtgctggagacagagtcttgaaccaacttctaact
gaaatggatggaatgaatgcaaagaaaaccgtctttatcattggggcaacaaacaggcca
gatattattgacccggcattgctcaggcctggacgtcttgaccaacttatctacatccca
ctcccagatgaggcttcgcgccttcagatttttaaagcatgtttgcgcaagtcccccatc
tctaaggatattgacctagcagctcttgcccgttatccgcacggttttagtggtgcagat
atcactgagatatgtcaacgtgcctgcaaatatgccatcagagaagacattgagaaggat
attgagagggaaagaagaaagaatgctaaccccgaagccatggaagaagatgaaattgat
gaggtagccgagatcaagccagcacactttgaggaatcgatgaaatatgcccggagaagt
gtgagtgatgcggacatcaagaagtaccagctatttgctcagactttgcagcaatctcgt
gggtttggatccgaatttcgatttcctgctcaacagacagagaacaatgcaggagaagct
gctctatccccattttcttcagccgcggttgctggagaggaagctgatctctatgattga
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