Malus sylvestris (European crab apple): 126599262
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Entry
126599262 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126599262 isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126599262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126599262
03012 Translation factors [BR:
msyl03012
]
126599262
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
126599262
Translation factors [BR:
msyl03012
]
Eukaryotic type
Release factors
126599262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
126599262
NCBI-ProteinID:
XP_050121568
LinkDB
All DBs
Position
14:complement(29132546..29148533)
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AA seq
515 aa
AA seq
DB search
MDIEEEIRSLQLDSEAEDNGAVKPDEAMPEVENESKMEEDPREEIHTQSDQSVVVEHKGK
AKEIPEPEEEHDDIELDRKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEA
KDKSRESWYMAYIMDTNEEEREKGKTVEVGRAHFETETSRFTILDAPGHKSYVPNMISGA
SQADVGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLLVVVNKMDDPTVNWSKER
YDEIGSKMVPFLKASGYNVKKDVQFLPISGLIGLNIKTRLDKSVCSWWDGPCLFEVLDSI
EVPLRDPKGSFRMPIIDRFKDMGTVVMGKVESGSVREGDSLVVMPNKVPVKAVALYIDDD
RVKRAGPGENLRVRLSGIEDEDILSGFVLSSVANPIPAVTEFFAQLQILELLDNAILTAG
YKAVLHIHSVVEECEIIELVSQMDPKTKKPMKKHIRFVKNGAVVVCKIQVGNMICIEKFA
DFPQLGRFTLRTEGKTIAVGKVIDQPSNYRNRSSA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgaggaggaaatccgatcgttacagcttgattcggaagcagaagataatggg
gctgttaagccagacgaagcaatgccggaagtagagaacgagagtaagatggaggaagat
cccagggaagagattcatacgcagtctgatcagtcagttgtagttgagcataaagggaaa
gcgaaggaaatcccagagcctgaagaagaacatgatgacattgaattagataggaagagg
cacttgaatgttgtttttattggccatgttgatgctggaaagtccacaacaggaggccaa
attcttttccttagcggtcaggttgatgatcgtacgatccaaaaatatgaaaaagaagca
aaggacaaaagtagggaaagctggtatatggcatatattatggataccaatgaggaagag
agagagaagggtaaaacagttgaagtggggcgggcccactttgaaaccgaaacatcaaga
tttacgattttggatgcacccggccacaaaagttatgttccaaatatgatcagtggtgca
tctcaagctgatgtaggagtactggtaatttctgctcggaaaggagaatttgaaactggg
tatgagaggggtgggcagacccgtgaacacgttcaacttgctaagacattgggtgtgtct
aagttgcttgttgttgtgaataaaatggatgatcccactgtgaactggtcaaaagaaagg
tatgatgaaattgggtcaaagatggtgccattccttaaagcatcaggctacaatgtgaaa
aaagatgtgcaattcctgcctatatctggcctgattggtttaaatataaaaaccagattg
gataaaagtgtttgttcgtggtgggatggtccctgccttttcgaagtccttgattctatt
gaagttcctctacgagatcctaaaggttcattcaggatgcctatcatagacagattcaag
gacatgggaacagttgttatgggcaaagtggaatctgggtcagtgcgtgaaggggattcg
ttggttgtcatgccaaataaggttccagtgaaggctgttgctctatacattgatgatgat
agggtgaaacgtgcgggccccggtgaaaatctacgggttagattatcgggcattgaggat
gaagatatattgtcaggctttgtcttgtcgagtgttgcaaatccaatacctgctgtaaca
gaatttttcgcccagttgcagatccttgaactgctggacaatgcaatcttgacggctggc
tataaagctgtcctgcatattcactcggttgttgaagaatgtgagattatagagcttgta
agtcaaatggatccgaagacaaagaaacctatgaaaaagcatattcgttttgtcaagaat
ggtgccgttgttgtgtgcaagattcaggtcggtaacatgatctgcatcgagaagtttgca
gactttccacaacttggaaggtttactcttcgtaccgaaggaaaaactattgcagttgga
aaagtgattgatcaaccttcaaattaccgcaacagatcaagtgcttaa
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