Malus sylvestris (European crab apple): 126599343 Help Entry 126599343         CDS       T09027                                  Name (RefSeq) vacuolar sorting protein 18-like   KO K20181   vacuolar protein sorting-associated protein 18 Organism msyl  Malus sylvestris (European crab apple) Pathway msyl04148   Efferocytosis Brite KEGG Orthology (KO) [BR:msyl00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     126599343  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:msyl04131]     126599343 Membrane trafficking [BR:msyl04131]  Endosome - Lysosome transport   Tethering complex    CORVET complex     126599343    Hops complex     126599343 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pep3_Vps18 Clathrin VPS18_RING_C zf-RING_Vps41 zf-RING_11 zf_RING_Vps8 zf-rbx1 zf_RING_Vps8_fungal zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-RING_2 Nup54_57_C zf-ANAPC11 zf-RING_5 Motif Other DBs NCBI-GeneID:  126599343 NCBI-ProteinID:  XP_050121668 LinkDB All DBs Position 14:complement(6951838..6960558) Genome browser AA seq 987 aa AA seqDB search MDSGRQVFTVDLLERYAAKGRGNITYMATGNDVILLGTSKGWIIRHDFGVGDSFDIDLSV GRPGEQSIHRVFVDPGGSHCIATVVGSGGADTFYTHAKWTKPRLLTKLKGLVVNAVAWNR QQITEASTKEVILGTDNGQLYEMAVDEKDKKEKYVKFLFELLELPEAFMSLQMEMATILS GTRYYVMAVTPTRLYSFTGIGSLETVFAGYSEQTVHFMELPGEIPNSELHFYIKQRRAIH FAWLSGAGIYHGGLNFGAQHSSPDGDENFVENKALLNYSTLSEGSEAVKPSSMAVSEFHF LLLIGNRVKVVNRISEQTIEELQFEQTPEAVSRGVTGLCSDATAGLFYAYDQNSVFQVSV NDEGRDMWKVYLDMKEYAAALANCRDPLQRDQVYLVQAEAAFAAKDYLRAASFYAKINYI LSFEEISLKFITVNEQDALRTFLLRKLDSLAVDDKCQVTMISTWATELYLDKINRLLLED DTAVDNRNSEYHLIIKEFRAFLSDSKVVLDEATTMRLLESYGRVEELVFFASLKEQYEIV VHHYIQQGEAKKALEVLQKPTVPIDLQYKFAPDLIMLDAYEAVESWMTTNNLNPRKLIPA MMRYSSEPHARNETHEVIKYLEYCVHRLHNEDPGVHNLLLSLYAKQEDDSALLRFLQFKF GKGREIGPEFFYDPKYALRLCLKEKRMRACVHIYSMMSMHEEAVALALQVDPELAMAEAD KVEDDEDLRKKLWLMVAKHVIEQEKGAKRENIRKAIAFLKETDGLLKIEDILPFFPDFAL IDDFKEAICSSLEDYNNQIEELKQEMNDATHGADNIRNDISALAQRYAVIDRDEECGVCR RKILTVGREYQLARGYASVGQMAPFYVFPCGHAFHAECLIAHVTRSTNEAQAEYILDLQK QLTLLDGEARKDSNGSLTEETITSMAPVDKLWSQLDDAVASECPFCGDLMIREISLPFIL PEEQQQNTSWEIKSHNLGHQRSLGLSL NT seq 2964 nt NT seq  +upstreamnt  +downstreamnt atggattcagggaggcaggtgttcacggtggatcttctggaacgatatgctgccaagggg cgcggaaatattacctatatggctactggaaacgacgtcattttgctcggaaccagtaaa ggttggatcattcgacacgatttcggcgtcggcgattcgtttgatattgatctttcggtg ggtcgtcctggggagcaatccatccatagagtttttgttgatcctggagggagccactgc attgccaccgttgttgggagtgggggtgctgatacgttctatactcatgcaaaatggacc aagccccgtcttttaaccaagctaaaaggtcttgtcgtgaatgccgttgcctggaacaga caacagattacagaagcttcaacaaaggaagtcattctcggtaccgacaacggccaactt tatgaaatggcagtcgacgagaaggataagaaggagaaatacgtaaagtttttgttcgaa ttattggaacttccagaggctttcatgagtttgcagatggaaatggcaaccattctcagt gggactagatactatgtaatggctgtaactcctacaagactctattcttttactggtatt ggatcactagaaactgtttttgctggttactcggaacaaacagtgcatttcatggaactt cctggtgaaattcctaacagtgaattgcatttctatatcaagcaaagaagagcaatacat tttgcatggctttctggtgctggtatatatcatggtggtttaaattttggagcacaacat agttctcctgatggagatgaaaattttgtggagaacaaggctcttttgaactattcaact ttgagtgagggttctgaagcggtgaaacccagttctatggctgtttcagaatttcatttc ttgcttcttatcgggaatagggttaaggttgtaaatagaataagtgagcaaactattgag gaacttcagtttgagcaaacacctgaagcagtttcaaggggtgtcactggattgtgtagt gatgccactgctgggttgttctatgcatatgatcaaaactctgtatttcaggtgtctgtt aatgatgaaggccgagacatgtggaaagtttacctggacatgaaggagtacgctgctgct ttggcaaattgccgcgacccacttcagagggaccaagtatatttggtgcaggctgaagct gcatttgccgccaaggattatcttagagcagcatcattctatgcaaaaattaattacata ttgtcgttcgaggagatcagtttgaagtttatcactgtaaatgaacaggatgccttaaga acctttctattgcggaaacttgatagccttgcggtggatgacaaatgccaagtaacaatg atttcgacgtgggcaactgaactgtacttggataagataaatcgtctactattggaagat gatactgcagtggataatcgtaattcagagtaccacttgatcattaaagagtttcgtgca tttcttagtgactccaaggttgttttggatgaggcaactaccatgagacttttagaaagt tatggccgagtcgaagagttggttttttttgctagtctgaaggaacagtatgaaattgta gtccaccattatattcagcaaggagaggcaaagaaagcattggaggtgctccaaaaacct actgttcctatagatcttcagtacaagtttgcaccagacctaatcatgcttgatgcatat gaagctgtagagtcatggatgactacaaacaacctcaatccaaggaaactcattcctgca atgatgcgttattcaagtgaaccacatgcaagaaatgaaacacacgaagtcatcaaatat ttggaatactgtgttcatcgtttgcataatgaggatcctggtgttcacaacttgctatta tcactatatgccaaacaggaagacgacagtgcacttttgcgtttccttcaattcaaattc ggaaaaggacgggaaattggcccagagttcttctatgatcccaagtatgctttacgcctt tgcctcaaggaaaagcgaatgcgtgcctgtgttcatatatatagtatgatgtccatgcat gaagaagcagttgctcttgccctgcaggttgatcctgagcttgctatggctgaggctgac aaggttgaagatgatgaggacctgagaaagaagctttggctcatggttgcgaagcatgtt atagaacaggaaaagggagctaaaagggagaacattcggaaggcaatagcatttcttaaa gaaactgatggccttttaaagatagaggatatattaccattctttccagactttgccctc attgatgacttcaaggaggcaatttgctcatcattagaggattacaacaatcaaattgaa gaactgaagcaagagatgaatgatgcgacacatggtgccgataacattagaaatgacatt agtgcacttgctcaaagatatgctgtgattgatcgtgatgaagaatgcggggtttgtcgg cgtaagattttaactgtgggtagggagtatcagttggctagaggctatgcatccgtaggc caaatggctccattctatgtgtttccatgcggacatgccttccatgccgaatgcctgatt gcccacgtcacacgtagtacaaatgaagctcaagcagagtatatactggatctgcagaag cagcttactctacttgacggggaagctaggaaggattcaaatggtagccttactgaggaa accataacaagcatggcccccgtagataagctgtggtcgcagttggatgatgcagtggca agcgaatgcccattttgtggggacctaatgatccgtgagatctctctacctttcatcctt ccagaggagcaacagcagaatacatcatgggagataaagtcacataatcttggacaccag aggagcctgggtttatctttatga

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