Malus sylvestris (European crab apple): 126599424
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Entry
126599424 CDS
T09027
Name
(RefSeq) DNA gyrase subunit B, chloroplastic/mitochondrial-like
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msyl03032
]
126599424
03400 DNA repair and recombination proteins [BR:
msyl03400
]
126599424
Enzymes [BR:
msyl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
126599424
DNA replication proteins [BR:
msyl03032
]
Prokaryotic type
DNA Topoisomerases
126599424
DNA repair and recombination proteins [BR:
msyl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
126599424
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
TOPRIM_C
Motif
Other DBs
NCBI-GeneID:
126599424
NCBI-ProteinID:
XP_050121756
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All DBs
Position
14:complement(11350554..11378917)
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AA seq
742 aa
AA seq
DB search
MALLLLRPPPPPPPSYLRFMALRFFSHSSLRPNFPPPSSSPSSSPSLARPSLLFNPQTRA
EFPLKGIGSCCVDRNVVSARAFMSSTTATEAFQGTTGSSAYGSDQIQVLEGLDPVRKRPG
MYIGSTGLRGLHHLVYEILDNAVDEAQAGFASKIEVILLADGSVSITDNGRGIPTDMHPA
TKKSALETVLTVLHAGGKFGGSSSGYSVSGGLHGVGLSVVNALSEALEVTVWRDGMEYQQ
KYCRGKPVTTLSCHVLPVEFQDRHGTRIRFWPDKEVFTTTIQFDYNTIAGRIRELAFLNP
NLMIALRQEDINPEKNHHNEYFYVGGLNEYVKWLNTDKKPLHDVVGFRKEVDGITIDVAL
QWCSDAYSETMLGYANSIRTVDGGTHIDGTKTSLTRTLNSLGKKSKVIKEKDITLSGEHV
REGLTYVISVKVPNPEFEGQTKTRLGNPEVRRVVDQTLQEYLTEYLELHPDVLDSILSKS
LNALKAALAAKRARELVRQKSVLRSSSLPGKLSDCSSTNPEESEIFIVEGDSAGGSAKQG
RDRCFQAILPLRGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIII
LTDADIDGAHIRTLLLTFFFRYQRALFDEGYIYVGVPPLYKVERGKQAKYCYDEAELKML
QNSFPLNACYNIQRFKGLGEMMPAQLWETTMNPEQRLLKRLGVGDAAEANMVFSSLMGAR
VDYRKELIKNSANMINFDQLDI
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttcttcttcttcgacctcctcctcctcctcctccctcttatcttcgcttcatg
gccttacgcttcttctcccactcctctctccgccctaacttcccgcctccctcttcttct
ccctcttcgtctccctcgcttgctcgtccctctcttctcttcaacccacaaaccagggcg
gaatttccattgaagggcattggtagctgctgtgtggatcgaaatgtggtttctgcaaga
gctttcatgtcgtctaccactgcaaccgaggcttttcaagggaccactggctccagtgct
tatgggtcggatcagattcaggtattggaaggcttagaccctgttaggaaaaggccagga
atgtatattgggagcacgggacttcgtggtcttcaccatttggtatatgaaatattagat
aatgcagttgacgaggctcaagccggatttgcttcaaagattgaggtcattttgctcgca
gatggttctgtgagcatcactgacaatggtcgtgggattccaactgatatgcacccagca
accaagaaatctgccttggagactgtgttgacggttttacatgctggtgggaagtttggt
ggttcaagtagtggctatagtgtgtctggtggattgcatggtgtgggtttatcagtcgtc
aatgccttgtctgaggctttagaagttactgtttggcgtgatggaatggaatatcagcag
aagtattgtcgtggaaagcctgtgacaactctatcctgtcatgtgcttccagttgaattc
caagatcggcatggaacacgcatcagattttggcctgacaaagaagtcttcacaactact
attcagtttgactacaacacgatagctggacgaattagggagctagcttttctaaaccca
aatctcatgatcgctcttagacaagaggatatcaatccagagaagaaccaccacaatgaa
tacttctatgtagggggtttgaatgaatatgtgaaatggctaaatactgataagaaaccg
cttcatgatgtggttggctttagaaaagaagtagatggaatcactattgatgtagctctc
cagtggtgttctgatgcatattcagaaacaatgcttgggtatgctaatagcatacggact
gttgatggaggaactcatattgatggaacaaagacttcattaacaagaacactaaatagt
cttggaaagaagtcaaaagttatcaaggaaaaggatattactttgagtggcgagcatgtg
agagaaggattgacatacgtcatctcggtcaaagttcccaatccggaatttgaaggccaa
acaaagactaggttgggaaatccagaagtgcggagagtggttgatcaaacacttcaagag
tatcttacggaatacttggagttgcatccagatgtactggattcaatcctttcaaagtct
ttaaatgctctcaaggcagctctggctgcaaagagggcaagagaactagttagacaaaag
agtgttttgagatcatcttctctcccaggaaaactatctgattgctcatcaacaaatcct
gaagaatcagaaatctttatagttgaaggtgattcagctggtggaagtgcaaaacagggt
cgtgataggtgctttcaggccattctaccactgaggggtaaaattctgaacattgaaagg
aaggatgaggcagcaatgtataaaaatgaagagattcaaaatctaattcttggtcttgga
cttggggtgaagggagaggacttcaagaaggaggctctacgttaccataagattatcatt
ttaacagatgctgatatagatggtgctcacatccgtactctgctactgacatttttcttc
agatatcagagagccttatttgatgagggctacatatatgttggcgttccaccgctttac
aaggttgagaggggaaagcaagccaaatattgctatgatgaagctgaacttaaaatgctt
cagaactccttccctttgaatgcgtgttacaacattcagagattcaaaggcctgggggaa
atgatgcccgcccagttatgggaaacaacaatgaatcccgagcaaaggcttcttaaacga
ttaggggttggggatgctgctgaggcgaacatggtgttttcgtcccttatgggtgctcgg
gtggattaccggaaggagctcataaagaattccgcgaacatgatcaacttcgatcagttg
gatatttaa
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