Malus sylvestris (European crab apple): 126599549
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Entry
126599549 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126599549
KO
K14791
periodic tryptophan protein 1
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msyl03009
]
126599549
Ribosome biogenesis [BR:
msyl03009
]
Eukaryotic type
90S particles
Other 90S particles
126599549
Pre-60S particles
Other pre-60S particles
126599549
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_TEP1_2nd
WDR55
WD40_Gbeta
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_2nd
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_NUP159_NUP214
Beta-prop_HPS5
WDR54
Beta-prop_WDR75_2nd
Beta-prop_Nup120_160
Beta-prop_VPS8
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
126599549
NCBI-ProteinID:
XP_050121900
LinkDB
All DBs
Position
14:10256613..10261615
Genome browser
AA seq
501 aa
AA seq
DB search
MISAISWVPKGVSKPVPSVADPPTKEEIEELIKTGALEKSGDAESEDDDGEMDVETPKQG
DQVSQALEVAKALGRAPKVTEPGAKFDDIADGLRELDMEHYDDEDDGIDVFSSGVGDLYY
PSNDMDPYLKKEKDDDEDSEDSDDMTINPSDAVIVCARNEDEVSQLEIWLYVESEDGEAD
VFVHHDVILSSFPLCTAWLDCPLKGGDKGNFVAVGLMDEPSIEIWDLDIIDEVQPCVILG
GIAEKKKKKGKKVSIKYKEDSHRDSVLGLAWNKEYRNILASASADKQVKIWDVATGKCNI
TMEHHTDKVQAVAWNHFAPQVLLSGSFDHTVVLKDGRVPSHSGYKWTVTADVESLAWDPH
TEHSFVVSLEDGTIKGFDIRAATSAPTSESKPSFTLHAHDKAVCSISYNPAAPNLLATGS
TDKMVKLWDLSNNQPSCISSRNPKAGAVFSISFAEDNPFLLAIGGSKGKLEVWDTSYDAA
VAQRFGSYYKKSRTQAGPSSG
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgatatcagcaatttcgtgggtgcccaaaggggtttcgaagccggttccctccgtcgcc
gacccgcccaccaaagaggaaatcgaagagctgattaaaaccggcgccttggagaaaagt
ggagatgctgaaagtgaggacgatgatggagaaatggatgttgaaacccccaagcagggt
gatcaagtctcccaagcattagaggtggcaaaagcactcggaagagctcctaaagttacc
gagccaggggccaagtttgatgacatagccgatggattgagggaactcgacatggaacat
tatgacgacgaggatgatggcattgacgtgtttagtagtggggttggggacctttactac
ccaagtaacgatatggatccatatctaaagaaggaaaaggatgatgacgaggattctgaa
gacagtgatgacatgacaattaatccaagtgatgcagtcatagtttgcgcccgcaatgag
gatgaagtcagccagcttgagatatggctgtatgttgaatcagaagatggtgaagcagat
gtttttgttcaccatgacgtcatcctttcatcatttcccctttgcacagcatggcttgat
tgtcctctcaaaggtggagacaaagggaacttcgttgctgttggtttaatggatgaacct
tccattgagatatgggatcttgacattattgatgaagtgcaaccatgcgtgatattgggt
ggtattgctgagaagaaaaaaaagaaaggaaagaaggtatcaatcaaatacaaagaagac
agtcacagagattcagttctcgggcttgcttggaataaggagtacagaaatatacttgct
agtgcaagtgctgacaaacaagttaagatttgggatgtggctaccggaaaatgtaatatt
accatggagcaccatacagacaaggttcaggcagttgcatggaatcattttgccccgcaa
gttcttctcagtggttcttttgatcatacagtagtcttgaaagatgggagggtgccatca
cattctgggtataagtggacagtcacagctgatgtagaaagcttagcatgggatccacac
actgagcattcatttgtggtgagcctagaagatggcacaatcaaagggtttgatattcgg
gctgccacatctgctcctacttccgagtctaaaccgagttttactcttcatgctcatgac
aaagctgtttgctcaatctcatataaccctgcagcacctaatcttcttgcaactggatcc
acagataaaatggtaaagctttgggatttgtcaaacaaccaaccttcatgcatttcatcc
aggaatcctaaagcaggagctgtcttttctatttcgtttgcggaagataacccttttttg
ctggccataggaggctcaaaagggaaactggaagtatgggatacatcatatgatgctgcg
gttgcccaaagatttgggagttactacaagaagagcagaacccaagctggaccttcatct
ggttaa
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