Malus sylvestris (European crab apple): 126599566
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Entry
126599566 CDS
T09027
Name
(RefSeq) putative RING-type E3 ubiquitin transferase C3H69 isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126599566
Enzymes [BR:
msyl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126599566
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
126599566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf_CCCH_4
zf-CCCH
Torus
zf-CCCH_2
zf-CCCH_3
zf-RING_2
zf-C3HC4
RING_XB3-XBAT31
zf-RING_5
zf-CCCH_9
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_2
zf-rbx1
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
126599566
NCBI-ProteinID:
XP_050121919
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All DBs
Position
2:37111593..37117781
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AA seq
409 aa
AA seq
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MSKRVLCKFFAHGACLKGEHCEFSHDWKASPNNICTFYQKGACAFGSRCRYEHVKASRAQ
SSGSSSSTNSQPSLAVDSASLALPVRTLASRVSLAPLSLSELSASSSPFLPPSKPAWNGS
LEDDYENDEVNVGETWSTRPEDRAICSFAAAGSCPRGEKCPHIHGDLCPSCGKHCLHPYR
PLEREEHMKTCEEKQKQLEALKRSQEIECSVCLERVLSKPTVAERKFGILSECDHPFCIS
CIRNWRSSSPTSGMDVNSALRACPICRKLSYFVIPSVIWYNSKEEKQEIVESYKARLRSI
DCKHFDFGNGNCPFGTSCFYKHTVKPGSYVWKFHRPPPRRPPPRRPPPRRYDIVPMDVII
HMFEHLEELDDYMFEDLENEDLNPWERELLMHMGLDTSDSSEDEIDLWP
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaagggttctctgcaagttttttgcacatggcgcctgtttgaaaggagagcat
tgtgagttttcacatgattggaaggcttcaccaaataatatatgtaccttttatcagaaa
ggagcttgtgcatttggtagtcgatgcagatatgaacatgtcaaagcttctcgggctcag
tcttcaggctcatcttcatcaacaaattctcagccatcccttgctgttgattctgcatct
ctggcacttcctgtgagaaccttagcaagcagagtttctcttgcacccctctctctttca
gaactctctgcttcaagtagccctttcttacctccctctaaacctgcctggaatggttct
ctggaggatgactatgaaaatgacgaagttaatgttggggagacttggagtactagacca
gaagatcgtgctatttgttcatttgctgcagctggtagttgtcctcgtggagaaaaatgt
cctcatattcatggagatttatgccccagctgtggaaaacattgcttgcatccttacaga
cctttggaaagggaggagcatatgaagacatgtgaggaaaagcagaagcaacttgaggct
ttgaaacgtagtcaagaaatagaatgcagtgtttgcctagaacgtgttttgtcaaagccc
acagttgctgagcggaagtttggaatactctcagaatgtgatcatcctttttgcatatct
tgtattagaaattggcgcagcagttccccaacttctggcatggatgtcaatagcgcattg
agagcttgcccaatatgtaggaagctgtcgtactttgtcattccaagtgtcatttggtat
aactcaaaagaagagaaacaggaaattgttgaaagctacaaggcaaggctcaggtcaatt
gattgcaaacactttgattttggaaatgggaactgcccatttggaactagttgtttttat
aagcatacggtcaagccaggctcatatgtatggaaatttcacaggccacctccaagaagg
cctcctccgagaaggcctcctccacggcgatatgatattgtgcctatggatgtcataatt
catatgttcgagcacttagaagaattggatgattatatgtttgaagatttagaaaatgaa
gatttaaacccatgggagagggagttattaatgcatatgggtttggatacaagtgactct
agtgaagacgagatagatttatggccttga
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integrated database retrieval system
