Malus sylvestris (European crab apple): 126599638
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Entry
126599638 CDS
T09027
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00040
Pentose and glucuronate interconversions
msyl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
126599638
Enzymes [BR:
msyl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
126599638
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
126599638
NCBI-ProteinID:
XP_050121991
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Position
14:complement(23968698..23970931)
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AA seq
411 aa
AA seq
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MARPSSGPSLLSLLLFSLLSPTLISCRPLHLQDPELVVQEVQRNISDSVSRRNLGYLSCG
TGNPIDDCWRCDPNWEKNRQRLADCAIGFGKNAIGGRDGKLYVVTDSGDDDAVNPKPGTL
RHAVIQDEPLWIIFQRDMTIQLKEELIMNSFKTIDGRGASVHIAGGPCITIQFVTNIIIH
GLNIHDCKQGGNAMVRNSPEHFGWRTISDGDGVSIFGGSHVWVDHCSLSNCKDGLIDAIH
GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV
VNNDYTHWEMYAIGGSANPTINSQGNRFAAPDIRFSKEVTKHEDAPESEWKNWNWRSEGD
LMLNGAFFRASGAGASSSYARASSLGARPSSLVGSITTTAGALSCRKGSHC
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggccctcctcaggcccctcacttctctctctcctcctcttctctctcctctcc
ccaaccctcatttcctgcaggccacttcatcttcaagaccctgaattggtagtacaagag
gtacaaaggaacattagcgactcagtgtctaggaggaacttgggctacttatcatgtggg
actggaaaccctatcgacgactgctggcggtgcgatccgaactgggagaagaacaggcag
cgtctagcagattgcgcgatagggttcgggaaaaacgccatcggtggaagagacgggaag
ctttacgtggtcacagattccggcgacgacgacgccgtgaaccccaagccaggaacccta
cgacacgccgtcatccaagacgagccgttatggatcattttccagcgcgacatgaccatc
cagctcaaggaggagctgatcatgaactccttcaagacaatcgacggccggggagcgtcc
gtccacattgccggcgggccatgcatcaccatccagttcgtgaccaacattattatccac
ggactgaacatacacgattgcaagcagggagggaacgctatggtgaggaactccccagag
cacttcgggtggaggaccatatcggacggcgacggagtgtcgatcttcggtgggagccac
gtgtgggtggaccattgctcgttgtccaactgcaaagatgggttgattgatgctattcat
gggtccactgcgataacaatttcaaacaattacatgacgcaccatgataaggtgatgctt
ttggggcatagtgattcgtatacacaagacaagaacatgcaagtcaccattgcattcaat
cactttggagaagggttggttcaaagaatgccaagatgtaggcatggatatttccatgtg
gtgaacaatgactatacccattgggagatgtacgctattggagggagtgcaaaccctaca
atcaatagccaagggaacagatttgccgcaccagatatcagattcagcaaagaggtgacc
aaacatgaggatgcaccagaaagtgaatggaagaactggaattggaggtcggaaggagac
ttgatgttaaacggtgcgttttttagggcatcgggtgccggagcttcctcaagctatgcc
agggcttcgagcttgggtgcaaggccatcttccctagtgggttcaatcaccacgactgcc
ggcgcacttagctgccgaaagggctctcattgctga
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