KEGG   Malus sylvestris (European crab apple): 126599740
Entry
126599740         CDS       T09027                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7-like
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl03020  RNA polymerase
msyl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    126599740
  09124 Replication and repair
   03420 Nucleotide excision repair
    126599740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:msyl03021]
    126599740
   03019 Messenger RNA biogenesis [BR:msyl03019]
    126599740
   03400 DNA repair and recombination proteins [BR:msyl03400]
    126599740
Transcription machinery [BR:msyl03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     126599740
Messenger RNA biogenesis [BR:msyl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     126599740
DNA repair and recombination proteins [BR:msyl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      126599740
SSDB
Motif
Pfam: SHS2_Rpb7-N S1 Sod_Cu Vg_Tdu
Other DBs
NCBI-GeneID: 126599740
NCBI-ProteinID: XP_050122118
LinkDB
Position
14:30186861..30197201
AA seq 176 aa
MFFHIVLERNMQLHPRHFGRNLRENLVSKLMKDVEGTCSGQHGFVVAITGIENIGKGMIR
DGTGFVSFPIKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
IGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPTTA
NT seq 531 nt   +upstreamnt  +downstreamnt
atgttcttccatatagtgctggagaggaacatgcagcttcatcctcgccactttggccgc
aatctccgtgaaaatctcgtttccaagctcatgaaagatgtcgaaggcacgtgcagtggt
caacatggatttgtggtagcaattacgggcatagaaaacattgggaaagggatgattcgt
gatgggacaggcttcgtctcattccccatcaagtaccagtgtgttgttttcagaccattc
aaaggagagatcttagaagctgttgttaccatggtcaacaagatgggattctttgctgag
gctggtcctgttcaaatctttgtttcgaaccacttgataccggatgacatggagttccag
attggggatatgccaaactatacaacatcagatggatcagttaagattcagaaagacagc
gaagtgcgattaaagataattggaacccgagtagatgctactgaaattttctgcattggc
accataaaggacgatttcttgggtgtgataaacgatcctacgactgcttaa

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