Malus sylvestris (European crab apple): 126599868
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Entry
126599868 CDS
T09027
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like isoform X1
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126599868
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
msyl01009
]
126599868
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126599868
03036 Chromosome and associated proteins [BR:
msyl03036
]
126599868
Protein phosphatases and associated proteins [BR:
msyl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
126599868
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
126599868
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
126599868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
HEAT_EZ
Vac14_Fab1_bd
HEAT_EF3_N
Htt_N-HEAT_1
TOR1L1_N
PDS5
CLASP_N
TAF6_C
Cnd1
Adaptin_N
INTS7_N
HEAT_DAAF5
XMAP215_CLASP_TOG
TPR_TNPO3_IPO13_3rd
DUF3730
Motif
Other DBs
NCBI-GeneID:
126599868
NCBI-ProteinID:
XP_050122282
LinkDB
All DBs
Position
14:complement(28513362..28518177)
Genome browser
AA seq
587 aa
AA seq
DB search
MAMVDERLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEHANILLPPLETLCTVEETCVRDKAVDSLCKIGGQMREK
DLVEYFIPLVKRLAAGEWFTARVSSCGLFHIAYTSAPETLKTELRTTYSQLCQDDMPMVR
RSAASNLGKFAGTVEAVHLKADIMSIFEDLTQDDQDSVRLLALEGFAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEATRSDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRIVNPELAIQQILPFVKELSTDSSQHVRSALASVIMGMAQVLEKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNEVIGIDMLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVEFFDDKLGSLCMQWLNDKVYSIRDAAANNVKRLAEEFGPEWAMQHIVPQV
LEMISNPHYLYRMTILHAISLLAPVLGSELTCSRLVPVIVTASKDRVPNIKFNVAKVLQS
IIPIVDQSVVEKTIRPCLLELSEDPDVDVRSFASQALQSSEQVMMSR
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctatggttgatgaacgtttatacccgattgcggttttaatcgacgagctcaagaac
gaagacattcagctccggttgaactcaatccggaggctttccacgattgcccgtgcgctg
ggagaagagaggaccaggaaggaactgattcctttcctcagtgagaacaacgatgatgat
gatgaagtgcttctggcaatggcggaagagttgggggtgttcatcccctatgtaggtggt
gtggagcatgccaacattctgcttccgcctttggaaacactctgcactgttgaggaaaca
tgtgtgagggataaggcggtggattcgttgtgtaaaattggggggcagatgagagaaaag
gacttggttgaatacttcattcctttggttaagagacttgctgctggcgagtggtttaca
gcccgagtttcatcctgtggtttgtttcatattgcttatactagtgcaccagaaacttta
aaaactgaactacgaacgacatacagtcaactgtgccaagatgacatgcccatggttagg
agatctgctgcaagtaacctgggaaaatttgctgggactgtagaagctgtgcacctcaag
gctgacataatgtctatatttgaggatttgacgcaggatgatcaggattctgttcggtta
ttggccttggagggttttgcagctcttgggaagttgttggagcctcaagattgtgtggcc
catattcttcctgtcattgttaacttttcacaggataagtcttggcgtgttcgatacatg
gttgcaaatcaattatatgagctttgtgaagctgttggtccagaagctacaaggtcagac
ctggtgcctgcatacgttcggcttcttcgggataatgaggctgaagtacgaatagctgct
gcaggaaaagtaactaagttttgccgaattgtgaatccagaacttgccattcagcagatc
cttccttttgtaaaggaattgtcgacagattcttcccagcacgttcgttctgcattggct
tcagtaataatgggaatggcacaagttttagaaaaggatgcaactatagagcagctgctg
cctatttttctttctcttctaaaagacgagtttcctgatgtgcgattgaatattattagc
aagcttgatcaagtcaacgaggtaattgggattgatatgctgtcccagtctttgttgccg
gcaattgttgaacttgcagaggatagacattggagggttcggcttgcgataatagaatac
attcctttattggcaagtcagttgggtgttgagttttttgatgataagcttggctctctc
tgcatgcagtggttaaatgataaggtttactcaatacgtgatgcagctgctaataatgtg
aagcgccttgcagaagaattcggccccgaatgggcaatgcagcatatagttccacaggtt
ttggaaatgataagcaacccccactatttgtatcggatgaccattctacatgccatttcc
ctacttgcccctgttttgggatcagaactcacttgttccaggcttgtaccggtgatagtc
actgcatcaaaagacagggtaccaaacatcaagttcaatgtggctaaggtgttgcagtcg
attattccgatagttgatcaatcggtggtggagaaaactattcgtccttgtttgcttgag
cttagtgaggatcccgacgttgatgtaaggtcctttgctagccaagcccttcagtcaagc
gaacaggtcatgatgtctcgctag
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integrated database retrieval system
