Malus sylvestris (European crab apple): 126599996
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Entry
126599996 CDS
T09027
Name
(RefSeq) recQ-mediated genome instability protein 1 isoform X1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
126599996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msyl03400
]
126599996
DNA repair and recombination proteins [BR:
msyl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
126599996
FA (Fanconi anemia) pathway
126599996
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Gene cluster
GFIT
Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
DUF4763
RFX5_N
Motif
Other DBs
NCBI-GeneID:
126599996
NCBI-ProteinID:
XP_050122448
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Position
14:22611170..22615824
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AA seq
743 aa
AA seq
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MSTLRRRLRLSYSSDEEEQPPPPPSQHQQSEEPGPQSHTVTHPPVTLDTPCPYPSDPLPV
TSSSSEEEFIDVSDNLSSPSPPPAPVLEPDTRQYSPPLAPAPEPVTRSHSPPMAQAPEPQ
NWPPPQRYDGCPISEHLQRLGLRLKREWLDACVHGLRQSVPGFQNFDVETKAKLCFEQFL
VSDMNRTGGGVLPENVASLHLVDLPGPYVLQVDEIVNISNPLKNRYQKTAVGLKRCLKLS
LTDGVQCVIAMEYRPIQALEALAPAGLKVAICNVHIRHGLLMLVPECIEVLGGLVEELDA
ACQRLVEEVNKPPRGNRTRNGVVPPLSTRLALAAWPPNTVNAAGHTNNSTMEAPTSVQAP
NQGATFSVSARNTSSVSSRNTISVSGRTTSSVCSRNSSPVTAEESTVPLSGQHSVVNPSS
TGGCGVDEMPMDTTPYSRRNAIPNPLSDDFGVENLHLNTIRSSVRHSRESRVPENAIPNP
SFEDAVEDIEMDAVHFGGENHTRDSILNDEDITMIDENETHRACASSDAVLNDEDTDVVN
EFDRPEILSGDRERPFDYLSSLSTKLVTMNIRSIQGKVKCVLTGVNKFQYIGDMYELGAY
VDDGTLISEILIDHKVVQNAIGHSPAEARAALSSPDNTEVRNMKAKMRQFQKFLTNFEHH
GPLCFQGIMLIEMRLHDLPIAIEMTQGCAESDAWLLLRRLKASSPARTSQHASAAAPTSR
HASPPGRASQHLSSQSYPIEISP
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgctcagacggcgcctccgcctcagctactcttccgacgaagaagaacaaccg
ccaccgccgccatcacaacatcagcaaagtgaagaacctgggccacaatcgcatactgtc
actcacccgcccgttaccctagacacgccatgcccttacccctccgatccactcccagtc
acctcctcctcctccgaagaagaattcatcgatgtctccgacaatctgtcgtcgccgtca
cctccgccggctccggtactcgaacccgatactaggcaatattctcctccgctggctccg
gcacctgaacctgttacccggtcacattctcctcccatggctcaggcaccggaaccccaa
aattggccacctccacagagatacgacggctgcccaataagcgaacatctccagaggtta
gggctaaggctaaagagggagtggctcgatgcttgcgtccatggactccggcaatccgtg
ccgggatttcaaaacttcgatgtggagacgaaggcgaagctctgcttcgagcagtttctg
gtttcggatatgaatcgaactggcggcggcgtgcttccggaaaatgtagcttctcttcat
ctcgttgatcttcctggaccctatgttttgcaggttgatgagattgttaacatcagcaat
cctctgaagaataggtatcagaaaactgctgttgggctcaagaggtgcctcaaattgtcg
ttgacagacggtgttcaatgcgtcattgctatggaatacaggcctattcaggccctagaa
gctttggctcctgctgggttgaaggttgctatatgtaatgtgcatatacgccacgggctt
cttatgctggtccccgaatgtattgaagttctaggaggattagttgaggaactcgatgct
gcgtgtcaacggcttgttgaagaagtaaataagcccccaagaggaaacaggaccaggaat
ggagtagttcctcctctatcgactaggttagctcttgctgcatggcctcccaatactgtt
aatgctgctggacacaccaataattcaacaatggaagccccgacctccgttcaagcaccc
aaccaaggtgctactttctctgtatctgctagaaataccagctccgtatcttctagaaac
accatctctgtatctggtagaactaccagctctgtatgttctagaaatagcagcccagtg
actgctgaagagtctactgttcctctcagtggacaacattctgttgttaacccatcatct
actggtggctgtggtgtcgacgagatgcctatggataccactccctatagcagaagaaat
gctattcctaacccattatcggatgattttggtgttgagaatctccatttaaatacaatt
cggtctagtgttcgtcatagtagggaaagtcgagtaccggaaaatgccattcctaaccca
tcctttgaggatgctgttgaagatattgaaatggatgctgttcattttgggggagaaaat
cataccagagattcaattttgaatgatgaggatatcactatgattgatgagaatgaaact
catagggcttgcgcatcctcagacgctgttttgaatgatgaggacaccgatgttgttaat
gaattcgaccgcccagaaatactatctggagaccgcgaacgtccttttgattacctatct
agtttgtcaaccaagttggttacaatgaacattcgttctattcaggggaaggttaagtgt
gttttgactggtgtgaataagttccaatacataggtgacatgtacgagcttggagcgtat
gttgatgatgggactctcatttctgaaattctcattgatcacaaagttgtacagaatgcg
ataggtcattctcctgcggaagccagagctgctctttcttctccagacaatacagaagtt
cggaatatgaaggcaaaaatgaggcagtttcaaaaattcttaacgaatttcgagcatcat
ggacctctatgttttcagggcataatgcttatagagatgagattgcatgatcttccaatt
gccattgagatgacgcagggttgtgctgaatctgatgcgtggttgcttttgaggagacta
aaggcttcctctccagctcggacatcacagcatgcctccgctgccgctccaacatcacgg
catgcttcccctcctggtcgagcgtcacaacatctctcctcgcagtcgtaccccattgag
atatccccctag
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