Malus sylvestris (European crab apple): 126600047
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Entry
126600047 CDS
T09027
Name
(RefSeq) AMSH-like ubiquitin thioesterase 1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
126600047
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
msyl01002
]
126600047
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126600047
04121 Ubiquitin system [BR:
msyl04121
]
126600047
Enzymes [BR:
msyl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
126600047
Peptidases and inhibitors [BR:
msyl01002
]
Metallo peptidases
Family M67
126600047
Membrane trafficking [BR:
msyl04131
]
Endosome - Lysosome transport
Others
Others
126600047
Ubiquitin system [BR:
msyl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
126600047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
126600047
NCBI-ProteinID:
XP_050122509
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All DBs
Position
14:28725858..28731119
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AA seq
525 aa
AA seq
DB search
MRSSSSSDRINIAASAQRLDVDNRIPLRIYFRIANNVLKQADIFRHEKNIIDLYIMLLRF
SSLVSETIPCHRDYRASVQGEKVFLKKKLFDALNELEELKPAVKQKFKPTVKQKSDEFNR
IYGKLNNGWSYNHQIDFVASPLKKQSLISYDATKAAGPAARELVHQPLRSQQFSYARPLE
HQFRKLSIVPRPNEETLSRHSVLGPNGLNGQWQPPKSDIGVQYPSILDLTPVEIPRLGQS
IEDEHTIIKDEKTNINDASDLEPERSSLEPILTQTTDGGQKDCTAELCSLISFESTETPD
DTKLVRQPSPPPVLAEVQDLIPAISSQASEVECGLETLSSDELRAESPLELHISTTMMEH
FMKLAKSNTDKSLETCGILGGSLKNRKFYVTALIIPKQESTSNSCQATNEEEIFEVQDKQ
SLFPLGWIHTHPTQSCFMSSIDLHTHYSYQIMLPEAVAIVMAPQGGSRTHGIFRLTNPGG
MSVIRQCQHRGFHPHDQPPDGGPIYKTCADVYMNPDLKFDVIDLR
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcgtcgtcttcttccgatagaattaacattgctgcgagtgctcagagactcgat
gtcgacaatcggattcctctgcgtatttactttcggatcgcaaacaatgtcctcaagcag
gctgacatatttcgacacgagaagaatattatagacctatacattatgctactaaggttt
tcaagtttggtctctgagacaataccgtgtcatcgagactatagagcatctgttcaagga
gagaaggttttcttgaaaaagaaattgtttgatgctctgaatgagctcgaggagctcaag
ccagcagtgaaacagaaatttaagccaacagtgaaacagaagagcgatgagtttaacaga
atatatggaaagttgaacaacgggtggagctataatcaccaaattgattttgtggcatcc
cctctcaagaagcaatctttgattagctacgatgcaaccaaggcagcaggaccagctgca
agagaacttgtccatcaacctctaaggtctcaacaattttcctatgccaggcctttggag
catcaatttcgcaaactatccatagttccacgtccaaatgaggaaactctttccagacat
tctgttttgggcccaaatgggcttaatggacagtggcagccacccaaaagtgatataggg
gttcagtatccaagtattttagacttgactcctgttgaaatcccaagactggggcagtcc
atagaagatgaacatacaattataaaagatgaaaagacaaatataaatgacgctagcgat
ttggaacctgaaaggtcaagtttggaaccaattcttacccagactactgatggtggccag
aaggattgtacagcagaactttgctccctcatttcttttgaatcaacagaaactcctgat
gatacaaaacttgtcagacagccttctcctccgcctgttcttgcggaagtacaagatttg
atcccagcaatttcatctcaagcctctgaggtagaatgtggactggagactctttcatca
gatgaacttcgtgctgaatctcccctggaattacatatttcaacaacaatgatggaacat
ttcatgaagctggctaagtcaaatactgacaagagcttagagacttgtggcatcctagga
ggctcactaaaaaacagaaaattttatgttacagctctcatcatacccaaacaggagtca
acttcgaattcgtgtcaggccacgaatgaagaggaaatatttgaagttcaggataaacaa
tctctctttcctcttggctggatacatacgcatcctacacagtcttgcttcatgtcgtcg
attgatctccatacccattattcatatcagattatgttgccggaagctgttgcaattgtc
atggcaccacaaggtggttcaagaacccatggcattttccgattgacaaacccaggcggc
atgtcagtcattagacagtgccagcaccgtggttttcatccacacgatcagccaccagac
ggtggacccatttacaagacctgtgcagatgtttatatgaaccccgatctaaagtttgac
gttattgatcttcgatag
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