Malus sylvestris (European crab apple): 126600241
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Entry
126600241 CDS
T09027
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
126600241
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
msyl04040
]
126600241
Ion channels [BR:
msyl04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
126600241
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Motif
Pfam:
Ion_trans
DUF6525
Motif
Other DBs
NCBI-GeneID:
126600241
NCBI-ProteinID:
XP_050122764
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All DBs
Position
14:29948751..30016179
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AA seq
790 aa
AA seq
DB search
MAGYDKDEVPMLSDTHPQYSDDSLQLKLDKFMSRTRSASVSIPMSSMDSSYEGKPRLVGH
TGPLRSQSKTLFVPMSGPLYANRRPDSIFRPVQAPTAGQEAVEPEGEKFPSTNATTENEW
AGENYVGKNEHLLRSGQLGLCNDPYCTTCPTFNLKAAQAKHRRASDIFDPKFHNALYGDA
KGWARRFFSFLRPYIPGVMNPHAKFVQRWNKFFVISCLISIFVDPLFFYLLSVEKENSCI
VIDWPLTTTLVVFRSITDIIFLLHILLQFRLAYVAPESRVVGAGELVDHPKKIALNYLQG
YFLLDFFIVLPLPQIIILLVLRNTLGSTGANHAKNLLRAAVLLQYIPKLYRFLPFLAGQT
PSGFIFESAWANFIINLLTFVLSGHVVGSCWYLFGLQRVNQCFRVACHNSGIYGCMDFLD
CGHGSQTDDPKAHNSLRDRWRLNENATACLTADGFDYGIYIQAVNLTTENSIVTRYVYGL
FWGFQQISTLAGNQVPSYFVWEVLFTMAIIGLGLLLFALLIGNMQNFLQALGRRQLEMSL
RRRDVEQWMSHRRLPEELRRRVREAERYNWAATRGVNEEMLLEVLPEDLQTDIRRHLFTF
IKKVRIFALMDEPILDSICGRLRQKTYINRSIVLSRGGLIEKMVFIVRGKMESIGEDGNR
ISLSEGDVCGEELLAWCLEHSSVNKDGKKIRIPGQRLLSNRMVRCLTNVEAFSLRAADIE
EVTSVFSRFLRKPRVQGAIRYESPYWRGLAARCIQVAWRYRKKRLQRADTSQSQSHSQPQ
SQSQSNNALL
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggctggttatgataaagatgaggtacccatgctatcagacactcacccgcaatactca
gacgatagtctgcagctaaaactcgacaaatttatgtcccgaacccgaagtgcatcagtt
tccatccctatgagctctatggactcgtcatatgaagggaaaccaagacttgtaggtcat
actggtccattgaggagtcaaagcaaaactcttttcgtacctatgagtggtccattatat
gctaaccgcaggcctgatagcattttccggccagttcaagctccaacagcagggcaagaa
gcggtggaacctgaaggagaaaagtttccttctaccaatgcaacaactgagaatgaatgg
gcgggtgaaaactatgtgggtaaaaatgaacacttgctgagatctggccaactggggctg
tgcaatgatccttactgcacaacttgcccaacattcaatctcaaggctgctcaagcgaaa
catcgaagggcgtcagatatatttgatcccaagttccataatgctctgtatggggatgcc
aaaggctgggcaaggagatttttctcttttctgcgtccatatattcctggagttatgaac
cctcatgctaaatttgtgcaacggtggaacaagtttttcgtcatttcttgcttaatatca
atttttgtagatccattgtttttctacctgctgtccgttgaaaaggagaatagctgtata
gttattgattggcccttgacgacaacacttgtggtatttagaagcatcactgatatcata
ttcctactgcacatactcctccagtttagattggcttatgtggctcctgagtctagggtg
gttggtgctggcgagttagtagaccatccgaagaaaatcgctttgaattaccttcaagga
tattttctactagacttttttattgtattaccgctgcctcagatcataatactgttagtt
ctacgaaacaccttgggatcaacaggagcaaaccatgcaaaaaatcttttacgtgctgca
gttcttcttcagtatattcccaagttgtataggtttctaccttttcttgctggtcagact
ccaagtggcttcatatttgagtcagcatgggcaaattttataataaatcttctcactttt
gtgttgtctggccacgttgttggatcgtgctggtacctctttgggctacagagggttaat
caatgttttcgagtggcctgccataactctggaatttatgggtgtatggacttcctagat
tgtgggcatggaagtcaaactgacgatcctaaagcacataattcattacgtgatcgctgg
agactcaatgagaatgctactgcttgtttaactgcagatggctttgattatggaatttac
atccaagctgtcaatcttacaacagaaaatagtatagtcactagatatgtgtatggattg
ttttggggattccagcaaatcagcaccctggctggaaatcaagttccaagctattttgtt
tgggaagtcctttttacaatggccatcattggcctaggtctcttgcttttcgctcttctt
attggaaatatgcagaactttctgcaggctcttggccggagacagttagaaatgtccctg
agacgtcgtgatgttgagcagtggatgagccataggcgcttaccagaggaacttagaagg
cgagtacgagaagctgagcggtacaattgggcagcaaccagaggagtaaatgaagaaatg
cttttggaagtcctgcctgaagaccttcagacggatataagacgccatctcttcacgttc
attaagaaagtacgaatttttgccctgatggatgaacccatcttagattccatttgtgga
agattaaggcaaaagacatacatcaacagaagtatagttttgtcccgtggtggtctcatc
gagaagatggtttttatagtgaggggaaaaatggagagcattggagaagatgggaataga
atttctttatctgaaggagacgtttgtggtgaggaacttctcgcatggtgtcttgagcat
tcttcagtaaacaaagatggtaaaaagatcaggattcccggacagcggttgcttagcaac
aggatggtaagatgcttaacaaacgttgaagcattttcactccgagcagctgacattgaa
gaagtcaccagtgttttctccagattcttgcgcaaaccacgtgttcaaggagccataagg
tatgagtcaccttactggagaggccttgcagcaagatgcattcaagtagcatggagatac
aggaaaaaacgcctacagcgagccgacacgtctcagtctcaatctcattctcaaccccaa
tctcaatcccaatccaataatgcattgttataa
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