Malus sylvestris (European crab apple): 126600242
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Entry
126600242 CDS
T09027
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
126600242
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
msyl04040
]
126600242
Ion channels [BR:
msyl04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
126600242
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
126600242
NCBI-ProteinID:
XP_050122768
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Position
14:29957111..29965719
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AA seq
668 aa
AA seq
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MYFINIFSSFFGMTRYKHFKKLMPISFILDRVQFHDALYEDDKGWAYRFFSCLCPFIPGV
INPYAKLVQQWNKFFVISCLLSIFVDPLFSFLLSVEKENSCIVLDRPLTTTLVVFRSITD
FIFLLHILLQKNESLSPSLPLSLQFRLAYVALESTVVGGVELVQHPKKIALNYLQGYFLL
DFFIVLPLPQIIILNTLGLTGANHAKNLLRAAVLLQYIPRLYRFLPLLAGPPPSGFIFES
AWPNFILNANFIINLLTFVLSGHLVGSCWYLFGLQRVSQCFREACHNSGIKGCMNFLDCG
PGSQTEDSKADNPLRLSWRNNVNATACLTADGFDYGIYVQAVNLTTENSMVTRYVYGLFW
GFQQISTLAGNQAPSYFVWEVLFTMAIAGLGLLLFALLIGNMQNFLQGLGRRRLEMSLRR
RDVEQWMRHRRLPEELRGLVREVEWYNWAATRGVNDEMFLEVLPEDLQMDVRRHLFKFIK
KVRIFALMDEPIVDSICGRLRQKIYIRGSKILYRGGLIEKMVFIVRGIVESIGENGHIIS
LSEGDVCGEELLTWCLEHSSVNKVGKMNRIPGQRLLSNRMVRCLTNVEGFSLQAADIEEV
ISVFSRFLRTPRVQGAIRYESPYWRALAAIRIQVAWRYRKKRLQRARHLSISISLSTPIR
SQSNDALL
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgtactttattaatatattctcatcgttttttggaatgacaagatataagcacttcaag
aaacttatgcctatttcctttattctcgaccgtgtgcagttccatgatgctctgtatgag
gatgacaaaggctgggcatatagatttttctcttgtctgtgtccatttattcctggagtt
ataaacccttatgctaaattagtgcaacagtggaacaagtttttcgtcatttcttgctta
ttatcaatttttgtagatccattgttttccttcctgctgtccgttgaaaaggagaatagc
tgtatagttcttgatcggcccttgacgacaacacttgtggtatttagaagcatcactgat
ttcatattcctactgcacatactccttcagaaaaatgaatccctctctccctctctcccc
ctctctctgcagtttagattggcttatgtggctcttgagtctacagtggttggtggtgtc
gagttagttcaacatccgaagaaaattgctctgaattacctccagggatattttctacta
gacttttttattgtattaccgctgcctcagatcataatactaaacaccttgggattaaca
ggagcaaaccatgcaaaaaatcttttacgtgctgcagttcttcttcagtatattcccagg
ttgtataggtttctacctcttcttgctggtccgcctccaagtggcttcatatttgagtca
gcatggccaaattttatactaaatgcaaattttataattaatcttctcacttttgtgttg
tctggccaccttgttggatcgtgctggtacctctttgggctacagagggttagtcaatgt
tttcgagaggcctgccataactctggaattaaagggtgtatgaacttcctagattgtggg
cctggaagtcaaactgaagattctaaagcagataatccgttacgtcttagctggagaaac
aatgtgaatgctactgcgtgtttaactgcagatggctttgattatggaatttacgtccaa
gctgtcaatcttacaacagaaaatagtatggtcactagatatgtgtatggattgttttgg
ggattccagcaaatcagtaccctggctggaaatcaagctccaagctattttgtttgggaa
gtcctttttacaatggccatcgctggcctaggtctcttgcttttcgctcttctcattgga
aatatgcagaactttctgcagggtcttggccggagacggttagaaatgtccctgagacgt
cgtgatgttgagcagtggatgagacatagacgcttaccagaggaacttagagggctagta
cgagaagttgagtggtacaattgggcagcaaccagaggagtaaatgacgaaatgtttttg
gaagtcctgcctgaagaccttcagatggatgtaagacgccatctcttcaagttcattaaa
aaagtacgaatttttgccctgatggatgaacccatcgtagattccatttgtggaagacta
aggcaaaagatatacatcaggggaagtaaaattttgtaccgtggtggtctcatcgagaag
atggtttttatagtgaggggaatagtggagagcattggagaaaatgggcatataattagt
ttatctgaaggagacgtttgtggtgaagaacttctcacatggtgtcttgagcattcttca
gtaaacaaagttggtaaaatgaacaggattcctggacagcggttgcttagcaacaggatg
gtaagatgcttaacaaacgttgaaggattttcactccaagcagctgacattgaagaagtc
atcagtgttttctccagattcttgcgcacgccacgtgttcaaggagccataaggtatgag
tcaccttactggagagcccttgcagcaatacgcattcaagtagcatggagatacaggaaa
aaacgcctacagcgagccagacacctctcaatctcaatctcattgtcaaccccaattcga
tcccaatccaatgatgcattgttataa
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