Malus sylvestris (European crab apple): 126600318
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Entry
126600318 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126600318
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126600318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msyl03021
]
126600318
Transcription machinery [BR:
msyl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
126600318
Prokaryotic type
Archaeal type
TFE
126600318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Zn_ribbon_8
CpXC
ADK_lid
HVO_2753_ZBP
Zn_Ribbon_TF
Zn_ribbon_IS1595
Cas12f1-like_TNB
Zn_ribbon_SprT
Motif
Other DBs
NCBI-GeneID:
126600318
NCBI-ProteinID:
XP_050122857
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All DBs
Position
14:complement(28145521..28151362)
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AA seq
470 aa
AA seq
DB search
MSIEPFNKLVKLTARAFYDDIPAKGENQPKTGRSDNRGIAVVVLDALSRRQWVREEDLAK
DLKLHSKQLRRTLRFFEEEKLVTRDHRRETAKGAKMHNAAVAATGDGPPVKEGEEKVKMH
THSYCCLDYAQIYDAVRYRLHRLRKKLKDELEDKNTVQEYVCPNCGKRYNALDALQLVSM
EDEYFHCENCNGELVAESDKLASQEVVGDGDDNARRRRREKLKDLLQKMEVQLKPLMEQI
NRVKDLSPPEFGSLQAWEARASAARRAENGESSAMDPSKSSHGMGYGGTPMPFLGDTKVE
VDFSGVEGRGKDIKSEADGTSLKVLPPWMIKQGMNLTKEQRGEVKQEQKMDGSGSVAAPE
FSEDKKFSTENNEKNIQDEYLKAYYAALIKRQQEEEAKKEQETHISDGPSAVAPNRQVGM
KSKREDEGEDNVDWEEAPVTGNAENYKVHDLNVEADATADDEDDIDWEEG
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcgagccgtttaacaagttggtgaagcttacagcgagggcgttctacgatgac
ataccggcgaaaggggagaatcagcccaagaccggccggagcgacaatcgggggattgcg
gtggtggtgctcgatgctctgtcgagacgacaatgggtaagagaagaagatttggcaaag
gacttgaaactgcactcgaagcaacttcgtcgtactttgcgattctttgaggaggaaaaa
ctggtcaccagagatcataggagagagacagctaagggtgcaaagatgcataatgctgct
gttgctgccacaggagatgggccacctgtaaaagaaggggaagagaaagttaagatgcac
actcactcttactgctgtctggactatgcacagatatacgatgcagtaaggtacagactg
caccgtttgcggaaaaaactgaaagatgagttggaggacaagaacacagttcaggaatat
gtatgccctaactgtgggaaaagatacaacgctttagatgctctgcaactggtttctatg
gaggatgagtacttccattgtgaaaattgtaatggagaacttgtggctgagagtgacaag
ctagcttcgcaagaagtggtaggagatggagatgacaatgcaaggaggcggcggcgtgaa
aaattaaaagacttgcttcaaaagatggaggtacagctgaagcctctaatggaacaaatt
aatagagttaaagacttatctcctcctgaatttggaagtctccaagcttgggaagcgcga
gcaagtgctgccagacgtgcagagaatggtgagtctagtgccatggatccctccaaatct
tcccatgggatgggatacggtggaacgccaatgccctttcttggagatacaaaggttgaa
gttgatttctctggggttgaaggaaggggcaaggatataaaatctgaagctgatggtaca
agcctgaaagttttgccaccttggatgatcaagcaaggcatgaaccttacgaaagaacaa
cgtggagaggtcaagcaggagcaaaagatggatggcagtggaagtgtagcagctccagag
ttctccgaagacaaaaaattcagtactgaaaataatgagaaaaatatacaggatgagtat
ttaaaagcatattatgctgctctaataaaaagacagcaagaagaagaagcaaagaaagaa
caggaaacacacatctctgatggtccctctgcagtggctcctaatcgtcaggttggcatg
aagtcaaagcgcgaggatgaaggagaagataacgtagactgggaagaggctccagttaca
ggtaatgcagaaaattataaggtccatgacttgaacgttgaggctgatgctacagcagac
gatgaggacgatatagactgggaggaaggctaa
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