Malus sylvestris (European crab apple): 126600402
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Entry
126600402 CDS
T09027
Name
(RefSeq) serine/threonine-protein phosphatase PP1-like
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126600402
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
msyl01009
]
126600402
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msyl03021
]
126600402
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126600402
03041 Spliceosome [BR:
msyl03041
]
126600402
Enzymes [BR:
msyl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
126600402
Protein phosphatases and associated proteins [BR:
msyl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
126600402
Transcription machinery [BR:
msyl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
126600402
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
126600402
Spliceosome [BR:
msyl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
126600402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
126600402
NCBI-ProteinID:
XP_050122938
LinkDB
All DBs
Position
14:complement(16735240..16739498)
Genome browser
AA seq
319 aa
AA seq
DB search
MDESIVDDLIRKLVAAKNGRTTKQVQLTEAEIRQLCSASKEIFLSQPNLLELEAPIKICG
DVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKIKYKENFFLLRG
NHECASINRIYGFYDECKRRFNVRIWKTFTDCFNCLPVAALIDEKILCMHGGLSPDLKHL
DEIRNIARPVDVPDQGLLCDLLWADPDKDVEGWGENDRGVSYTFGADKVAEFLQKHDLDL
ICRAHQVVEDGYEFFGKRKLVTIFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKKG
KLGINNMLRPGTPPHKGKG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggacgagagtattgtcgacgatcttatacgaaagcttgtggctgcgaagaatggccgg
accaccaaacaggtgcaactgacggaagctgaaatacggcagctttgctctgcctccaag
gaaatctttctcagtcagccgaatcttctggagcttgaagctccaattaagatttgtgga
gatgttcacggtcagttttcagatcttttgcgactgtttgagtatggtgggtacccacca
gaagccaattatttattcctaggagactatgttgatcgtggtaagcagagcatagagaca
atatgccttctccttgcatacaagatcaaatacaaggagaacttttttctcctcagaggc
aaccatgaatgcgcttccatcaaccgcatctatggattctatgatgagtgcaagagaaga
tttaatgttcgtatttggaagacatttactgactgcttcaactgtcttcctgttgctgct
cttattgatgagaagatcctttgcatgcatggcggtctatctcctgatttgaaacactta
gatgagatcaggaatattgcacggccagtggatgtgccagatcagggccttctctgtgat
ctattatgggctgatcctgataaagatgttgaaggttggggagagaatgatcgtggcgtg
tcatatacatttggggctgacaaggttgctgagtttctccagaaacatgacctagatctt
atttgccgcgctcatcaggttgtggaagatggatatgagttttttggaaaaaggaagctg
gttaccatattttcagctccaaattactgtggtgagtttgataatgctggtgccatgatg
agtgtagatgatacattgacatgttccttccagattttgaaagcctctgagaagaaggga
aagcttgggataaacaacatgttaagaccaggaactcctcctcacaagggtaagggctga
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integrated database retrieval system
