Malus sylvestris (European crab apple): 126600566
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Entry
126600566 CDS
T09027
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03015
mRNA surveillance pathway
msyl04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126600566
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
126600566
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
msyl01009
]
126600566
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126600566
03036 Chromosome and associated proteins [BR:
msyl03036
]
126600566
Protein phosphatases and associated proteins [BR:
msyl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
126600566
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
126600566
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
126600566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Cytokin_check_N
Motif
Other DBs
NCBI-GeneID:
126600566
NCBI-ProteinID:
XP_050123105
LinkDB
All DBs
Position
14:24960751..24965896
Genome browser
AA seq
516 aa
AA seq
DB search
MTLSSGPPAPLPLEWKFSQVFGERAPGEDLHDGYTLSLCDMISAIGFDKSGDFLAIGDRG
GRCVIFERKDGKHTLNQQRPQHELEQLDFTSTQHPEFQFKTEFQSHEPEFDYLKSVEIEE
KINKVRWCATSSGSQFMLSTNDKTIKLWKVKESKVKKVKEMTPYALASSDNLLLAERSFI
SREDKPPFPNGYRREWIEKMTKNMSSSEDMHTKVADIEDNAHTRCRKVYAHAHDFNINSI
SNNSDGETFLSADDLRINLWNLEISDQCFNILDMKPPNMEDLTEVLTAAEFHPIHCNLLA
YSSSRGFIRLVDMRQSALCDHSARILQDGDSHVPKSFFTEIIASISDIKFFKDGRHILSR
DYMNLKIWDMHMDSSPVAIYKIHEQLRPKLSELYNNDRIFDKFGCCFSGDGLHFATGSYS
NLVRIFSHGDGSEGATIEASKTPNSRKPILQTAPRARRSSLSNLARGFYRHGHENSSSGG
NDSSYDLSSKILHLAWHPETNLIASAAGNSLFMYYA
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgactttgagctctggccctccggcccctctgcctttagagtggaaattctctcaggtc
ttcggcgaacgagctcccggagaagaccttcacgatggttatactctctctctatgtgat
atgatatccgcaattggattcgacaagagtggtgatttccttgccattggagatcggggt
ggccgatgtgtgatattcgagaggaaggatgggaaacatactttaaatcagcaacgccct
caacatgaattggagcagttggatttcacgtccacccagcatcctgaatttcagtttaag
actgagtttcagagtcatgaacctgagtttgactacttaaagagtgtggagattgaagag
aagatcaacaaagtaagatggtgtgcaacatctagtggatcccagttcatgctttcaaca
aatgacaagacgataaaactgtggaaggttaaggaatccaaggtgaagaaagtaaaagaa
atgaccccttatgcactggcatcttcggataatctgcttctggcagaaaggagtttcatt
agcagagaagataaaccaccttttcctaatggctatcgtcgggaatggatagagaagatg
actaaaaacatgtcatcttctgaagacatgcatacgaaggttgctgacattgaagacaat
gctcatacaagatgccgaaaggtgtatgcccatgctcatgattttaatattaactccatc
tcaaataatagcgatggtgaaacatttctttctgcggatgaccttagaataaacttgtgg
aatcttgagatcagtgaccagtgtttcaatatccttgatatgaagccaccaaacatggag
gaccttactgaggtcttaacagcggctgaattccatccaattcattgtaatctgcttgca
tacagcagctcaagaggttttattcgtttagttgacatgcggcagtcagcgttatgtgat
cacagtgcaagaatattacaagatggagattcccatgtgccaaagtcatttttcacagaa
attattgcatctatctctgatataaaattttttaaggatgggcggcacatcttaagtcgc
gactacatgaatctaaagatctgggacatgcatatggattcttcaccagttgcaatatac
aagattcatgaacaactgcgccctaagttatctgagttgtataacaatgatcgcatattt
gataaattcgggtgctgtttcagtggagatggacttcattttgcaaccgggtcttatagc
aacctagtgcgcattttttcccatggagatggaagtgaaggagctacaatagaagctagc
aaaactcccaacagcaggaagccaattctccagactgctccaagggcaaggaggtcatcc
ttgagcaacctggcacgaggattttaccggcatgggcatgaaaattcaagctctggcggt
aatgacagtagttacgacctaagctccaagattctacatttggcatggcatccagaaaca
aacttgattgctagtgctgctgggaatagcttgttcatgtattatgcatag
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