Malus sylvestris (European crab apple): 126600778
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Entry
126600778 CDS
T09027
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 16 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
126600778
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
msyl04040
]
126600778
Ion channels [BR:
msyl04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
126600778
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
UBM
Motif
Other DBs
NCBI-GeneID:
126600778
NCBI-ProteinID:
XP_050123380
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Position
14:complement(25472426..25475979)
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AA seq
712 aa
AA seq
DB search
MMHSFQPYAAASARFRNFSTPFSLSKKIPWWYQILDPGSERVTQWNHIFFVICIVGLFLD
PLYFFLPTTASDQVACMQIDMGLGILVTFLRTVADFFYIINILIKFRIAYIDPGSRVFGR
GQLIKDPRAIAIRYLKGDFSIDLAASLPLPQIVIWFVIPAVKNPTAAHANHTLSLIVLIQ
YIPRFIQLFPLNRRITKSTGVVAKTAWSGAAYNLVLFCLIAHDGCCSSVQIVGASWYVMS
IRRQYECWTGECKKEVNNTHSPSCKISFLDCGSADNPERKLWLQITKVQTSCDAAGKDEF
EFGMFAEAFTNEVASAYIIEKYFYCLWWGMRNLCSYGQDIKTSTFISETSFCILIAVLGL
VLFSHLMSQMQTYLQSATIRLEEWRVKRRDTEEWMRHRQLPAELQERVRRFVQYKWIATR
GVDEKNILQSLPADLRRQIQRHLCLALVRRVPFFAQMDDQLLDAICERLESSLNTRNTYI
IREGDPVNEMLFIIRGQLESSTTDGGRTGFYNSTTLRAGDFCGEELLTWALMPTSSLNLP
CSTRTVRSLTEVEAFALRAEDLKFVATQFKRLHSKRLQHAFRYYSHQWRTWGACFIQVAW
RRFRKRKLAMELAIEEEYYYAHVLEQEELGNGNESRVGTSRDYDGIGGAERSSSEANRQQ
NIPLGPAILASKFAATTRRGIQKVASVIQHDETSSSMPKKLFKPIEPDFSAD
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgatgcacagcttccagccgtatgccgcagcctcggctcgcttccgcaacttctcgacc
ccattttccctcagcaagaagatcccgtggtggtaccagatcctcgacccaggatccgaa
cgcgtgacgcaatggaaccacatcttctttgtcatatgcatcgtcggcctcttcctcgac
cccctctatttcttcttgcccaccacggctagcgaccaagtcgcttgcatgcagatcgac
atgggccttggcatcttggtcacctttctccgtacggttgccgacttcttctacattatc
aatatcctaatcaagtttcgaattgcttatatcgatccaggttctagggtttttgggcgg
ggccagctcattaaggaccccagggctatcgccatccgctacctcaagggcgacttctct
atcgatcttgccgcctccctaccactcccacagattgtgatttggtttgtaattccagca
gtgaaaaacccaacagctgctcatgctaatcataccctttctttaattgtgctcattcaa
tatattcctcgatttattcaacttttccctctcaaccgacgaattactaaatcgaccggc
gttgtagccaagactgcttggtcaggggcagcttacaatctcgttctgttttgtctaatt
gcacatgatggttgttgttcttcagtgcagattgttggagcttcatggtatgtgatgtcc
attagacggcagtacgagtgctggacgggagaatgtaaaaaggaggtgaataacacacat
tctccatcctgtaaaatttcgtttctggattgtggcagtgccgataaccccgaacgaaaa
ctttggctgcaaatcacaaaagttcagactagttgtgatgcagctggtaaggacgaattt
gagtttggaatgtttgcggaggctttcactaatgaggttgcttctgcatacatcattgaa
aaatatttctactgcctttggtggggtatgagaaatttatgttcatacggacaagatatt
aagacaagcacttttatcagtgaaacctcattttgcattctcattgccgttcttggtcta
gttctcttctcacatctcatgagccagatgcagacctatctgcaatctgcaacgattaga
cttgaggaatggcgggtaaaaaggagagacacagaggagtggatgaggcaccgtcagctc
cctgcggagctgcaagagcgtgttcgtcggtttgttcaatataaatggattgccacaaga
ggtgtggatgagaaaaacattttgcaatccttgcctgcagatctccgccgccagatccaa
aggcatttatgccttgcccttgttcgccgtgtaccctttttcgcacaaatggacgatcag
cttctagacgccatatgtgaacgtctcgagtcatccctgaataccaggaacacatacatc
atcagggaaggtgatcctgtgaatgagatgcttttcatcatcagagggcaacttgagagc
tccacaactgatggtggaaggacagggttctacaactcaactaccctcagggctggcgat
ttctgcggcgaagagttgctcacatgggccttgatgcctacatcaagcctcaaccttcca
tgctcgacgcgtacggtgaggtccctaaccgaagttgaggcatttgcgctgagagctgaa
gacctcaagttcgttgccactcaattcaagcgccttcacagcaaaagactgcagcatgct
tttcggtactattcacaccagtggagaacttggggggcttgttttatacaagttgcttgg
agaaggtttaggaagagaaagttggcaatggagttggcaatagaggaggagtactattac
gcacatgttttggagcaagaagagcttggcaatggcaatgaatctagagtaggaactagt
agagattatgatggtataggaggtgctgagaggtcatcgtccgaggcgaataggcagcag
aatattccgcttgggccggcgatattggcttccaaatttgctgcaaccaccagaagaggg
attcagaaggtggcatcggttattcaacatgatgaaaccagctctagtatgcccaaaaaa
ttgttcaagccaattgaacctgatttttcagcagattag
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