Malus sylvestris (European crab apple): 126600787
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Entry
126600787 CDS
T09027
Name
(RefSeq) transcription initiation factor TFIID subunit 12-like isoform X1
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126600787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msyl03021
]
126600787
03036 Chromosome and associated proteins [BR:
msyl03036
]
126600787
Transcription machinery [BR:
msyl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
126600787
Coactivators
SAGA/TFTC/STAGA complex
126600787
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
126600787
STAGA complex
126600787
TFTC complex
126600787
SAGA complex
126600787
SLIK complex
126600787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
TFIID-31kDa
Motif
Other DBs
NCBI-GeneID:
126600787
NCBI-ProteinID:
XP_050123395
LinkDB
All DBs
Position
14:complement(1900553..1905528)
Genome browser
AA seq
567 aa
AA seq
DB search
MDQQNSTTTPTPSASQPSIEPPPTAQSQPPPQPQPPPSSSLTTTPTSTPSPPSPNPNPKP
STPLPPQPLHQPQPPPQSLPPPSQPRPPSTLTRPPWQQQSHFHQYPSPSSSASSGPPPPP
SPSQPPPPRGGIAIGVSAHHTGPSTPQPTPYSSSYGHHFGGMGRGGVSVPEPVSNSSPSQ
VRPSMQGMQGIGMMGSLGSSSQMRPTGIPAHHPQRPVQSSLRPPSTASNQSPSSQNFQGH
SLLRVSSVGSASSSPNASQGLQPHTQPWLSSGPQGKPPIPSPSYRQQMNSPSMQQRSHLP
QQQQQSHPHPTASQQQHHPMPSAPQQQHHPLPSASQQQHHSLPSASPQQPLPSASQQQHT
SSVQQVQQSRVPQTTPRQQQITRVQGPVNPKSSTLVAAQPNTVQSGAQNKTLSPEIDESC
NRILGKRSIRELVNQIDPSEMLDPEVEEILMDIADEFVDSITTFSCSLAKHRKSTQLEAK
DILLHIEKNWNITLPGFGGDEIKGFRKPLTNDIHKERLAVIKKSIVATETANARNPTGQA
AGNAKGSLVKTPANIISSLNSKMREVT
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggatcaacagaactccaccaccactccaactccctccgcctcccaaccatccattgaa
ccacccccaaccgcccaatcccagcctccacctcagcctcagccaccgccgtcctcctcc
ttaaccaccactccaacctccaccccaagccccccttccccaaaccctaaccctaaaccc
tcaaccccattgcccccacaaccactacatcaaccgcaaccgccaccccagtcccttcca
cccccttcgcagcccaggcctccctccacattgactcgtcctccttggcagcagcagtcc
cacttccaccagtacccttcgccttcttcttccgcttcgtctgggcctcctccgccgcct
tcaccctctcagcctcccccaccgaggggtggcattgccattggtgtttctgcgcatcac
accggcccttctactcctcaacccactccgtattcgtcttcctacgggcatcattttggt
gggatgggccgtggcggcgtctctgtgcccgaacctgtatccaattccagtccttcccag
gtgagaccatcaatgcaaggaatgcagggaatagggatgatgggttcactcggttctagt
tctcaaatgcggccaactgggattccggcacaccatccacagagaccagttcaatcctct
cttagaccaccatctactgcgagtaatcagtccccgtcttcccaaaatttccaagggcac
agccttttacgagtttcatcagttggatctgctagttcatcaccaaatgcatctcaaggt
ttgcagcctcatactcagccatggttgtcatctgggccacaagggaagcctcctattcct
tccccttcatataggcagcagatgaactcgccatccatgcagcaaagatcacatcttccg
cagcaacagcaacagtctcatccccatcctacagcttcacagcagcagcaccatccaatg
ccttcagctccccagcagcagcaccatcccctgccttctgcttcacagcagcagcaccat
tccctgccttctgcttcaccacaacaacccctgccttcagcttcacagcaacagcataca
tcatctgtgcaacaagttcagcaatcaagggtcccacaaaccacgcctcgtcagcaacag
atcacaagggttcagggccctgtgaatcctaagtcttccactcttgtagctgcacagcct
aacacagtccaatcaggggcccaaaataaaactcttagtccagaaatagatgaatcttgt
aataggattcttggcaaaagaagcatccgtgagctagtcaaccagattgatccatctgag
atgttggatccagaagttgaagaaattctcatggacattgcagatgaatttgttgattct
attacaacatttagttgctcactagccaagcatagaaaatcaactcaattagaagcaaaa
gacatacttctacatattgaaaagaattggaatataactctgcctgggttcggtggtgat
gagattaaaggcttcagaaaaccacttacaaatgatatccacaaggagcgtcttgctgtg
ataaagaagtccatagtagcaactgagacagcaaatgctaggaatcccactggacaagct
gctggaaatgcaaagggtagtcttgttaagacacctgccaacatcataagctccctaaac
tctaaaatgcgtgaagttacataa
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