Malus sylvestris (European crab apple): 126600814
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Entry
126600814 CDS
T09027
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase alpha catalytic subunit-like
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
126600814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msyl03032
]
126600814
Enzymes [BR:
msyl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
126600814
DNA replication proteins [BR:
msyl03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
126600814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DNA_pol_B_2
DNA_pol_B_exo2
Motif
Other DBs
NCBI-GeneID:
126600814
NCBI-ProteinID:
XP_050123428
LinkDB
All DBs
Position
2:14352022..14362084
Genome browser
AA seq
1528 aa
AA seq
DB search
MADDEQATAATGRRRGRGPEASARAGALERLKALRHGGRRSETGGFQIKMEDRIYDTVGD
DEYDAIVAKRREEVRGFIVDDNGLGYCDEGEEEDWTRAGPSLDESDGGDRPKRKKVEKKE
KDKDKEPRPKKPNSSLTAAAAMMGKQRLSSMFTSSIFGKNRDNERGKGLNCDRIVDDVIA
EFAPDENDREKRRGQLNKIFVXNSSVKSEIGSDRGVNIAMKVELNRVVASGSDSVVGSVQ
IYEGVEENEGKKEVVFEVGDPPIEEIHDFSEREGAIEEKNVNFIEEKVEPVKKKEEVFTL
NAKIKEDNKDPSLSAMAGWKAVRTGGDGNVGGSVLEVNSGSNKEELLQCDLEEDGSLPFY
MIDAYEEFYGANMGKLYLFGKAKAGSSYQSCCVVVENMQRCVYAIPNSSVFHSDEIMKLE
KDAEESRISSREFRTKLHDMALGLKSDIAKKLLDQNVSAFSMAPVKRNYAFERSDIPAGE
NYVLKINYPFKDPXLPADLKGETFHALLGTHSSALELFLVKRKIKGPSWLSVSGSEFRTV
SQRVSWCKFEVVVKSAKDIQVSNCPKKTAEAPPVVVTAISLKTINFDEIVSASVICCHKA
KIDTPALASEWTRPGMLSHFTVVRKLDGGIFPMGFTKEATEKNSKAGSNVLSIESIERAL
LNRLMIELHKLDSDVLVGHNISGFDLDVLLRRAKACKVPNAMWSKIGRLKRSVMPDLAKG
GTIFGSGASQGIMSCISGRLLCDTYLCSRDLLREVSYSLTQLAKTQLNKDRKEILPHEIP
RMFQKSEFLMELIEYGETDAWLSMELMFHLSVLPLTRQLTKISGNLWGKTLQGARAQRVE
YLLLHAFHAKKYIVPDKMHLKETDSVKRKTDNGVDDKNVDELDVNFDNDAKKDHGKGKKG
PAYAGGLVLEPKRGLYDKYILLLDFNSLYPSIIQEYNICFTTVERSSEGLAPRLPYCKKI
GLLPELLKDLVERRRNVKKWMKGLKIQQLDIQQQALKLTANSMYGCLGFPNSRFYAKPLA
ELITLQGREILQSTVDLVQNNLNLEVIYGDTDSMMIYSGLDDIAKAKAIARKVIQEVNKK
YRCLEIDLDGLYKRMLLLKKKKYAAVKVQFKNEMPYEVIERKGLDMVRRDWSLLSKEMGD
FCLSQILSGGSCEDVVESIHDALMKVQEEMRNGQVAIEKYVITKSLTKPPEAYPDAKNQP
HVQVALRLKQSGYSAGCSAGDTVPYIICCEQGTSLGNSTVIAQRARHPDELKREDGKWMI
DIDYYLSQQIHPVVSRLCASIQGTSPGRLADCLGLDSSKFKGDSSEAVSDDPSNLSLLLD
DEERFRGCEPLILACPSCSDTFSCPTILNSISMSITKKQTKSQAEECTSDFWYTLRCAKC
PGEGDMGRLSPVMIANQVKRQVDGFVSMYYRGFMTCDDESCQYKTRSLNLRLVGNAERGT
VCPDYPRCNGRLVRKYTEADVYKQLSFFCHVLDTVRCIEKTEASTRLPVEMELAKLRSVV
NLAASTVQRIRDRCAYGWIQLQDLCITV
NT seq
4587 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacgagcaagcgacggcggccaccggtaggcggcggggccgaggaccagag
gcgtcggcccgtgccggagccctcgaacgcctcaaagctctccgccatggcggccgccga
tctgaaactggcgggttccaaatcaagatggaggatagaatctacgacaccgtcggagac
gacgagtatgacgcaattgttgccaaacgacgggaagaggtccgaggcttcatcgtagac
gacaatggcctggggtactgcgatgagggcgaggaagaggactggacccgggccggtccg
tcattggatgaatcagacggcggtgataggcccaagaggaagaaagtcgagaaaaaggaa
aaagacaaggacaaagagcctcggcccaaaaagcccaattcgtcgctcacggcggcggct
gcgatgatggggaagcagaggctttcgtcgatgttcacgtcgtcgatttttgggaaaaat
agagataatgaaagggggaaagggttgaattgtgatagaattgtcgatgatgtgattgcg
gagtttgcgccggatgagaatgacagagagaagcggaggggacaattgaacaagattttt
gtgntgaattcgagtgttaagagtgaaattgggtctgataggggtgtcaatatagcaatg
aaggttgaattgaatagagttgtggcaagtggtagtgattctgtggtgggttctgtgcag
atttatgaaggggttgaagaaaatgagggcaagaaggaggtggttttcgaagtcggtgat
cccccaattgaggaaatccatgatttttcagagagggaaggggcaattgaggagaaaaat
gtgaattttattgaagagaaagtggaacctgtgaagaaaaaggaagaggttttcactttg
aatgcaaagattaaggaagataataaggacccgtcattgagtgccatggctggatggaag
gccgtgaggactggaggggatgggaatgttggtggcagcgttttggaggtcaatagtggc
tcaaataaggaagagcttttgcagtgtgatctggaagaagatggttcactgcctttttac
atgattgatgcttatgaagagttctatggtgctaatatgggcaagctttatctgtttggg
aaggccaaagcaggaagttcataccagagttgttgtgtggttgtagagaacatgcagaga
tgtgtctacgcaattccaaacagttctgtatttcacagtgatgaaatcatgaagcttgaa
aaggatgctgaagagtcgaggatatcatccagagaattccgtacaaagctgcatgacatg
gctttgggtttaaagagtgacatagcaaagaagttgttggatcaaaatgtatcagctttt
agcatggcaccggttaagagaaactatgcatttgagcgatctgacatacctgccggagag
aattatgtacttaagatcaattatccattcaaggatccctgacttccagcagatctcaaa
ggagaaacattccatgctcttctaggaacacatagcagtgcgttggagctttttcttgtt
aaaaggaagataaaaggaccttcttggctatcagtttcaggttctgagtttcgcacagtt
tcacaacgggtaagttggtgcaaatttgaggtggtcgttaaatctgcaaaagacatacag
gtctcaaattgcccaaagaagactgcagaggctcccccagtggttgttactgcaataagt
ttgaaaactattaattttgatgaaattgtctctgcatctgttatctgctgtcacaaggcc
aagattgacactcccgcgttggcatcagagtggacgagacctggcatgctgagccatttt
actgttgtccgtaaacttgatggaggcatatttcccatgggcttcactaaggaggctaca
gaaaagaattctaaagctggatcaaatgttttaagcatcgaaagcatcgaaagggcttta
ctaaaccgtttgatgattgaattacacaagttggacagtgatgttcttgttggacacaat
atatctggatttgacctggatgtccttctccgtagagctaaggcttgtaaggtgccaaat
gccatgtggtccaaaataggccgtctcaagcgttctgtgatgcctgaccttgcaaaagga
ggcaccatttttggatctggagcaagtcaagggatcatgtcctgcatttctggtcgcctt
ttgtgtgatacatacttgtgttcccgtgacttgttaagggaggttagctattctttgaca
caacttgcaaagactcagctgaataaagaccgaaaggagatcttgccgcatgaaattcct
agaatgttccagaaatcagaatttctaatggaactgattgaatatggtgagacagatgca
tggctgtctatggaactcatgtttcatttgagtgttcttcccctcacccgccagctgaca
aagataagcggtaatctgtgggggaaaaccctacaaggtgctagggcacaaagagtagaa
tatcttttgctgcatgcattccatgcaaaaaaatatattgttccagacaagatgcatctg
aaggaaacagattcggtaaagcgtaaaacagataatggtgttgatgataaaaatgttgat
gagttggatgtaaattttgataatgatgcaaagaaggatcatgggaaaggcaagaaaggt
cctgcctatgcaggtggattggtattggagccaaaaagagggttatatgacaagtatata
ttacttctcgacttcaatagtctttacccgtctattattcaggaatacaatatctgtttc
acaacagtggaaagatcttcagaaggattggctcctcgtttaccatattgtaaaaaaatt
gggctcctacctgagttgttaaaagatctagttgaaaggaggagaaatgtaaagaaatgg
atgaagggtctcaagatccagcaacttgacattcaacagcaagctctaaagctgacggca
aatagtatgtatggatgcttggggtttccgaattcgagattttatgcaaagccactggca
gagcttataacactgcaagggagagagattctgcaaagtactgttgatcttgttcagaac
aatttgaacctagaggtgatctatggtgatactgattcaatgatgatttatagtggactg
gatgatattgcaaaagcaaaagcaatcgcacggaaagtcattcaagaggttaacaagaag
tataggtgtttggaaattgatcttgacgggttgtacaagagaatgttgcttctcaagaaa
aagaaatatgcagctgtgaaggtgcaattcaagaatgagatgccctatgaggttattgag
cgcaagggtcttgatatggttcgccgggactggagcttactttcaaaggaaatgggagat
ttctgcctaagtcaaattttatcaggagggtcatgtgaggatgtcgttgaatcaattcat
gacgctctgatgaaggtgcaagaggagatgagaaacggacaagtagcaattgagaaatat
gtcatcactaagtcattgactaaaccacctgaagcatacccagatgccaaaaaccaacca
catgttcaggtggcattaagattaaagcaaagtggttattctgctggttgttctgctggc
gatacagtcccctatatcatttgctgtgagcaggggactagtttaggtaattcaacggtg
attgctcaacgtgctagacaccccgatgagttaaaacgagaagatgggaaatggatgatt
gacattgattactacttgtcccagcagattcatcctgtggtatcacgtctttgtgcttca
attcagggtaccagccccggacgcttggctgattgtttaggacttgactcttctaagttc
aaaggtgactcaagtgaagctgtcagtgatgatccttccaacttgtcccttcttcttgat
gatgaagagagatttcgcggttgtgagcctttgatcttggcatgtcctagctgttccgat
acttttagttgtccaactatcttgaattccatttctatgtcaatcaccaaaaagcaaaca
aagtcacaagccgaggagtgtaccagcgatttttggtatacattacgatgtgcaaaatgc
cccggggaaggagacatgggcagactgtctcctgtaatgatagccaaccaggtgaaaagg
caagtagacggttttgtttcaatgtactataggggctttatgacgtgtgacgatgaatct
tgccagtacaaaacacgaagtctcaacctccggcttgttggcaatgctgagaggggaaca
gtttgtccagactaccctcgctgcaatgggcgtcttgtaagaaagtacacggaagcagat
gtgtacaagcagctctcgtttttctgccatgtcttggatacagtgcgctgcatagaaaag
acggaggcaagcactagactaccggtagagatggagttggccaaacttcggtcagttgtg
aatttggctgcctcaacagttcagaggattcgggaccgttgtgcgtacggatggatacag
ctgcaagatctttgcattacagtttaa
DBGET
integrated database retrieval system
