Malus sylvestris (European crab apple): 126600848
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Entry
126600848 CDS
T09027
Name
(RefSeq) prolycopene isomerase, chloroplastic-like
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00906
Carotenoid biosynthesis
msyl01100
Metabolic pathways
msyl01110
Biosynthesis of secondary metabolites
Module
msyl_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
126600848
Enzymes [BR:
msyl01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
126600848
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GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
HI0933_like
GDI
Thi4
GIDA
Pyr_redox_2
FAD_binding_3
GMC_oxred_N
MCRA
Motif
Other DBs
NCBI-GeneID:
126600848
NCBI-ProteinID:
XP_050123487
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Position
14:4225537..4231203
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AA seq
692 aa
AA seq
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MPFSHSLSIPELGFSPSMEIYQFPSRHCSTQLSSSKPRIQNHRFQQHGYQGNGVSLCGLQ
LGSWSSQAFGHGCSLQLGRVRPRSRKLKVLSFGHGRSSLPNDCKLSGLGLGYGKSKLFQG
SHLGGSDFSRYRHGRVELGLDEVNSRNFSFVVRSSSTLSVEKEVEREGGGGKKNYDAIVI
GSGIGGLVAATQLAVKGAKVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLN
LITQALAAVGCEMPVIPDPTTVHYHLPDNLSVVVHREYSEFISELTNKFPHEKQGILKFY
GVCWKIFNALNSLELKSLEEPIYLFGQFFQKPVECLTLAYYLPQNAGDIARKYIQDPQLL
SFIDAECFIVSTVKALQTPMINASMVMCDRHYGGINYPVGGVGGIAKSLAKGLVDQGSEI
LYKANVTNIIVDQGRAVGVRLSDGREFFAKTIISNATRWNTFGKLIKADQVPKQEEDFQK
VYVKAPSFLSIHMGVKAEVLPPETDCHHFVLEDDWTRLEEPYGSIFLSIPTVLDSSLAPE
GRHILHIFTTSSIEDWEGLSRKDYEAKKELVADEIICRLENKLFPGLKSSIVFKEVGTPK
THRRYLARDKGTYGPIPRNTPKGLLGMPFNTTAIDGLYCVGDSCFPGQGVIAVSFSGVMC
AHRVAADIGLEKKSPVLDAALLRLLGWLRTLA
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgcccttttcccactcactttccatacctgagcttggattctctccttccatggagatt
tatcagtttcccagtcgccactgcagcacccagttgagttcttcaaaacccagaattcaa
aatcacagatttcagcagcatggctatcagggaaatggcgtcagcctctgtggattgcaa
ttggggtcttggagttctcaagcttttggccatggatgtagtttgcagttgggtagagtc
agacccagaagccgaaaactcaaagttctctcctttgggcatggtagaagctcacttccc
aatgattgcaagctcagtggattgggtttagggtatggcaaaagcaaattgtttcaaggg
agtcatttggggggttcagattttagtaggtacaggcatgggagagtggaattggggttg
gatgaggtgaattcgaggaattttagtttcgttgtgaggtctagttcgacattgagtgtg
gagaaagaggtggaaagggagggaggtggcgggaagaaaaattatgatgccattgttata
gggtcaggaattggagggttggttgcagcaacacaattggctgtgaagggtgcaaaggtt
ttggttttggagaagtacgtgattcctggtgggagctctgggtattatgagagggatggt
tatacttttgatgttggatcttctgtgatgtttgggttcagcgataagggcaatttaaat
ttgataacccaagcactggcagctgtaggttgtgagatgccggtgatacctgatccgact
actgtccattaccatctacctgataatctttctgtcgtagtgcacagagaatacagtgaa
tttatttcagaacttactaataaatttccccatgaaaagcaagggattctcaaattctat
ggtgtatgttggaagattttcaatgccttgaactcattggaactgaagtcacttgaggag
ccaatctacctttttggacagttctttcaaaagcctgttgaatgcttgacacttgcctac
tatttgcctcaaaatgctggggatatagctcgcaaatacattcaggacccccagctgttg
tctttcatagatgcagagtgttttattgtgagtacagtcaaggctttgcaaacaccaatg
atcaatgcaagcatggttatgtgtgataggcattatggtgggattaactaccctgttggt
ggtgttggtggaattgcaaagtccttagcaaagggtctggtagaccagggcagtgagata
ctttacaaggccaatgttactaacatcatagttgatcagggcagagcggttggagtaagg
ctttcagatgggagggaattctttgcaaaaaccataatatcaaatgctacaagatggaat
acctttggaaaactgataaaagcagaccaggtcccgaaacaagaggaagattttcagaaa
gtttatgttaaggccccatcttttctttccattcacatgggggtgaaagctgaggttttg
ccaccagaaacagattgccaccattttgtgctggaggatgattggacgaggttagaagag
ccttatggaagtatatttttaagcattccaactgttcttgattcatcgttggccccagaa
ggacgccatattcttcacatatttacaacctcttccatagaggactgggagggactctct
cgaaaggactatgaggcaaagaaggagcttgtagcagatgaaatcatttgcagattagag
aataaactatttccagggctcaaatcgtccatcgtttttaaggaggtgggaacaccaaag
acacacaggcggtacctggctcgtgacaagggtacttacggaccaataccacgaaatact
cctaagggattattgggaatgccattcaataccactgccatagatggtctttactgtgtt
ggtgatagctgctttccgggacaaggagttatagctgtatccttctcaggagtaatgtgt
gctcatcgagtagctgctgatattgggcttgagaagaagtcaccagtattggatgctgcc
ctccttcgactacttggatggttaaggacattagcgtga
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