Malus sylvestris (European crab apple): 126600895 Help Entry 126600895         CDS       T09027                                  Name (RefSeq) pre-mRNA-splicing factor RSE1   KO K12830   splicing factor 3B subunit 3 Organism msyl  Malus sylvestris (European crab apple) Pathway msyl03040   Spliceosome Brite KEGG Orthology (KO) [BR:msyl00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     126600895  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:msyl03021]     126600895    03041 Spliceosome [BR:msyl03041]     126600895    03036 Chromosome and associated proteins [BR:msyl03036]     126600895 Transcription machinery [BR:msyl03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      126600895 Spliceosome [BR:msyl03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     126600895  Complex B     126600895  Complex C    U2 SnRNP specific factors     126600895 Chromosome and associated proteins [BR:msyl03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      126600895     TFTC complex      126600895 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_RSE1_2nd Beta-prop_RSE1_1st CPSF_A Motif Other DBs NCBI-GeneID:  126600895 NCBI-ProteinID:  XP_050123556 LinkDB All DBs Position 14:4786962..4797492 Genome browser AA seq 1360 aa AA seqDB search MAVSEEECSSAKSRSSSSASSSSSSHYLAKCVLRGSVVLQVLYGHIRFPTTYDVVFGKET SIELVIIGEDGIVQSICEQPVFGTIKDISILPWNDKFCTQNPQMVGKDLLVVISDSGKLS FLSFCNEMHRFFPVTQVQLSNPGNSRNQLGRMLAIDSSGCFIAASAYENRLAMFSVSLSG GSDIIDKKILFPPENEVDGSAARVQKNSIHGTIWSMSFISKDPSQSSKEHSPVLAIILNR RDAVLNELLLLGWNIRDQDIYVISTYVEDGPLAHSIVEVPHSHGFAFMFREGDALLMDLR DAHNPFCVCRTSSNFLSNVVDEANFVQESSRGCDLSRVLQVDDEGGLFNVAACALLELSD LDPMCIDGDKYNVNVTYKHVCSWTWELGNVKNPRMIVCADTGEYFMIEIIFGPDGPKVQE SECLYQGSPSKALLWAEGGFLAALVDMGDGMVLKMENGMLLYTSPIQNIAPVLDMSVVDY HDEKHDQMFACCGVAPEGSLRLIRSGISVEKLLRTAPIYQGITGTWTLRMKVIDSYHSFL VLSFVEETRVLSVGLSFTDVTDSVGFQPDVSTLACGIVNDGLLVQIHKNAVRVCLPTKAA HSEGIPLPSPVFTSWFPENMSISLGAVGHNLIVVSSSNPCFLFILGVRVLSSHQYEIYEM QHLSLQNELSCVSIPHKRFGQTNNSLPFGVDVSNTFVIGTHKPSVEVLSYGPNEGVTILA SGMISLTNTLGTAISGCIPQDVRLVLVDRLYVLAGLRNGMLLRFEWPAASAMPLSVLTSQ SLVGRQIYDKLYEKTKDYYPVELQLIATRRIGITPVFLVPLSDSIDGDIVVLSDRPWLLH TARHSISYTSISFQSSTHVTPVCYVECPKGILFVAENCLHLVEMVHSNRLNVQKFHLGGT PREVLYHSESRLLLVMRTDLIDDTCSSDICFVDPLSGSVLSSFKLEPGETGKSMELVRVG NEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCLEHMQNSDSGSMTFCSKAGSSSQRAS PFHEIVGYATEQLSSSSLCSSPDDTSCDGIKLEETEAWQFRFAYSSTWSGMVLAICSYLD RYFLASAGNAFYVCGFPNDNPQRVRKFNVARTRFMITSLTAHFTTIAVGDCRDGVLFYAY HEDSKKLQQLYFDPCQRLVADCILMDVNTAVVSDRKGSIAILSSADYSEDSASPECNLTV SCAYYMGEIAMSIRKGSFSYKLPADDVLKGSDGNIDFSRNAIIVSTLLGSIITFVPISRE EYELLEAVQDRLVVHPLTAPILGNDHNEYRGRENPAGVPKILDGDMLSQFLELTSMQQEA VLSSPFGAQGTPKPSLKSRHVPIPVNQVVQLLERVHYALN NT seq 4083 nt NT seq  +upstreamnt  +downstreamnt atggctgtctcagaggaagagtgttcctccgccaagtctcgatcgtcttcgtcggcctcc tcctccagcagctctcactacctcgccaagtgcgtcctccgcggaagcgtcgtacttcag gtcctctacggtcacatccgcttccccaccacttacgacgtcgtcttcggcaaggagact tcaatagagttggtaataattggggaagatggaattgtacaatctatatgtgagcagcct gtgtttggtaccattaaagacatttccattctaccctggaatgacaaattctgcacgcaa aacccgcagatggtgggtaaagaccttttggttgttatttctgattccgggaagctctcg tttctctcgttttgcaatgaaatgcacaggttttttcctgtgacacaagttcaactttct aatcctggaaattcaaggaatcagcttggaagaatgctagcaatcgattcaagtggctgt ttcattgctgctagtgcttatgaaaaccgtttggctatgttctctgtttcattgtctgga ggcagtgacattattgataagaaaatactatttcccccagaaaatgaagtagatgggagt gctgccagagtccagaaaaacagtattcacggtaccatatggagcatgagctttatttca aaggatcctagtcaatcaagtaaggagcatagtcctgtacttgccattattctaaatagg agagatgcagtccttaatgaattgctgttactgggatggaatattagggatcaggatata tatgttatttctacatacgttgaagatggaccattagcacatagtattgttgaagttcct cattctcatggatttgcttttatgtttagggagggtgatgctctcctaatggatcttaga gatgcacacaaccccttctgtgtctgtagaacaagctcaaatttcttatccaatgtggtt gatgaggcaaattttgttcaagagtcatctagaggatgtgatctgtctagagtacttcag gttgatgatgaaggaggtttattcaatgtagctgcttgtgctttactagaactgagcgat ttagatccaatgtgcatagacggtgataaatacaatgtgaatgtgacttacaaacatgtg tgttcatggacttgggaactggggaatgtaaaaaatcctagaatgatcgtttgtgcagat acaggagaatatttcatgatcgaaattatctttggtcctgatggccccaaggttcaagaa tctgaatgtctttaccaaggttcaccatccaaggcacttctgtgggctgaaggcgggttt cttgctgcactagtagacatgggggatggaatggtcttgaaaatggaaaatggaatgctt ctttacacaagtcctattcaaaatattgccccagtgttggatatgtcagttgttgattac catgatgaaaaacatgatcaaatgtttgcctgttgtggagtggcacctgagggatcatta aggcttattagaagtggtatcagtgtggaaaagctactaaggactgcgcctatttatcaa ggaattactggtacttggacattacgaatgaaagtaattgattcttaccattcttttctt gtgctatcatttgtagaggagaccagggtattatcagttggtttaagctttactgatgtg acggattcagttggttttcagcctgatgttagtactttggcttgtggtattgtaaatgat gggttgctggttcagattcacaaaaatgcagttagggtctgtttgcccaccaaggctgcc cattctgaaggtattccacttccttctcctgttttcacatcttggttcccagaaaatatg agtatcagtttgggggctgttgggcataatctcattgttgtttcttcatctaatccatgc tttttattcattcttggggtcagagtgctttcgtcacatcagtatgaaatttatgagatg caacatttgagcttgcaaaatgaattatcatgtgtttctattcctcataaacgttttggg caaaccaataattctctcccatttggagtcgacgtaagtaatacctttgttattggcaca cacaagccctcagtggaagttttgtcttatgggcctaatgaaggcgtgacaattcttgct tctgggatgatctcattaacaaatactttaggaacagctattagtggctgcattcctcaa gatgtaaggcttgtattagttgacagattgtatgtccttgcgggattgaggaatggaatg ctacttcgttttgaatggcctgctgcctctgcaatgcctctgtctgttttaaccagtcag agtcttgttggccgacaaatatatgataagttatatgagaagacaaaggactattatcct gttgagctgcagttgattgccactcgtcgcattggcatcactccagttttcttggttcct ttgagtgactcgatagatggtgatatagttgttctcagtgataggccttggttgttacat actgcaaggcacagtatctcgtacacttctatctcatttcaatcttcaacacatgtcact cctgtatgttatgtcgaatgccctaagggaattttatttgttgcagagaactgtctacat ttggtagagatggtgcacagcaataggcttaatgtgcagaagtttcatcttggaggcact ccgagagaggtcctttatcatagtgaaagcaggctattgcttgtgatgaggactgatttg attgatgatacatgctcatcagatatatgtttcgttgatcctctaagtgggtctgtgctg tcatccttcaaacttgaacctggtgaaacaggaaaatcaatggagttagtgagggttgga aatgaacaagttcttgtggttgggacgagcttatcttctggtccagccataatgcccagt ggtgaggctgagagtaccaagggccgtcttattgttctttgtcttgaacacatgcaaaat tcagacagtggctcaatgacattctgctcaaaggcagggtcatcttctcaacgagcatct ccgtttcatgaaattgttggatatgccacagaacagctttctagcagtagtctctgcagt agtccagatgacactagctgtgatggaattaaacttgaagaaactgaagcatggcagttt cgattcgcttattcatccacatggtctggaatggtacttgcaatctgctcttatcttgat cgttacttcttggcttctgctggcaatgctttttatgtatgtggtttccccaatgacaac ccacaaagagtgagaaagtttaatgtggcaaggacacgttttatgattacatcattgact gcacatttcactacaattgctgttggtgattgtcgtgatggtgtccttttctatgcttat catgaggattccaaaaagctgcagcaactgtactttgatccatgtcagagattagttgct gattgcattcttatggatgtcaatactgctgttgtttcagatcggaagggaagcattgct atcctttcatctgcagattactcagaagatagtgcaagtccagaatgtaatttaacagtg agctgtgcatattatatgggggagatagctatgagcatcaggaaggggtcattttcatat aaacttccagctgatgatgtattgaagggcagtgatggaaatatcgacttctctcgaaat gctatcattgtgagtacgctgcttggaagcataataaccttcgttccaatatccagggaa gaatatgaactcttagaagctgtccaggatagactggtggtgcatccgttaactgctcct attcttgggaatgatcacaatgagtatcgtggtcgtgaaaacccggcgggagtacctaag atacttgacggggacatgctctctcaattcttggagctcacaagtatgcaacaagaggct gtactatcatcaccctttggtgcacaaggcacaccaaagccctctctgaaatcacgacat gtaccaatacctgttaatcaggttgttcaactcctcgagcgggttcattatgccttaaac taa

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